| line |
true |
false |
branch |
|
138
|
312 |
0 |
if $args{'PRIMARY'} |
|
139
|
312 |
0 |
if $args{'SOURCE_TAG'} |
|
140
|
0 |
312 |
if $args{'SEQNAME'} |
|
141
|
0 |
312 |
if $args{'ANNOTATION'} |
|
142
|
0 |
312 |
if $args{'LOCATION'} |
|
143
|
312 |
0 |
if $args{'SENSE'} |
|
144
|
312 |
0 |
if $args{'ANTISENSE'} |
|
145
|
0 |
312 |
if defined $args{'START'} |
|
146
|
0 |
312 |
if defined $args{'END'} |
|
147
|
0 |
312 |
if defined $args{'STRAND'} |
|
148
|
0 |
312 |
if defined $args{'SCORE'} |
|
149
|
312 |
0 |
if defined $args{'RANK'} |
|
150
|
0 |
312 |
if defined $args{'FXGC'} |
|
152
|
0 |
312 |
if ($args{'TAG'}) |
|
176
|
312 |
0 |
if (defined $rank) { } |
|
178
|
0 |
312 |
if $self->has_tag('rank') |
|
182
|
0 |
0 |
if ($self->has_tag('rank')) { } |
|
207
|
0 |
0 |
if (defined $fxGC) { } |
|
209
|
0 |
0 |
if ($fxGC =~ /[^.\d]/) |
|
215
|
0 |
0 |
if ($fxGC < 0 or $fxGC > 1) |
|
223
|
0 |
0 |
if $self->has_tag('fxGC') |
|
224
|
0 |
0 |
unless $self->add_tag_value('fxGC', $fxGC) |
|
228
|
0 |
0 |
if ($self->has_tag('fxGC')) { } |
|
252
|
312 |
0 |
if ($soligo) { } |
|
253
|
0 |
312 |
unless $self->_add_oligo($soligo, 1) |
|
273
|
312 |
0 |
if ($asoligo) { } |
|
274
|
0 |
312 |
unless $self->_add_oligo($asoligo, -1) |
|
284
|
0 |
624 |
unless ($oligo->isa('Bio::SeqFeature::SiRNA::Oligo')) |
|
300
|
0 |
0 |
unless $feat->primary_tag eq 'SiRNA::Oligo' |
|
301
|
0 |
0 |
unless $feat->strand == $strand |