Subroutine Coverage
| Bio/Seq/Quality.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
27 |
29 |
93.1
|
| pod |
20 |
25 |
80.0
|
| line |
count |
pod |
subroutine |
|
173
|
9 |
n/a |
BEGIN |
|
175
|
9 |
n/a |
BEGIN |
|
202
|
862 |
Yes |
new |
|
251
|
1506 |
Yes |
qual |
|
272
|
2 |
Yes |
qual_text |
|
299
|
317 |
Yes |
subqual |
|
314
|
5 |
Yes |
subqual_text |
|
328
|
0 |
Yes |
quality_length |
|
344
|
1 |
Yes |
quality_is_flush |
|
370
|
11 |
Yes |
trace |
|
387
|
1 |
Yes |
trace_text |
|
415
|
2 |
Yes |
subtrace |
|
430
|
5 |
Yes |
subtrace_text |
|
444
|
1 |
Yes |
trace_length |
|
460
|
1 |
Yes |
trace_is_flush |
|
485
|
0 |
Yes |
get_trace_graph |
|
519
|
1226 |
Yes |
threshold |
|
546
|
4 |
Yes |
mask_below_threshold |
|
586
|
301 |
Yes |
count_clear_ranges |
|
613
|
300 |
Yes |
clear_ranges_length |
|
643
|
303 |
Yes |
get_clear_range |
|
682
|
2 |
Yes |
get_all_clean_ranges |
|
712
|
307 |
n/a |
_find_clear_ranges |
|
763
|
1037 |
n/a |
_empty_cache |
|
774
|
1 |
No |
trace_indices |
|
779
|
764 |
No |
trace_index_at |
|
785
|
1 |
No |
sub_trace_index |
|
791
|
1030 |
No |
qualat |
|
797
|
767 |
No |
baseat |