| line |
true |
false |
branch |
|
239
|
0 |
195 |
if $meta |
|
240
|
1 |
194 |
if ($nm and ref $nm eq 'HASH') |
|
245
|
1 |
194 |
if $forceflush |
|
304
|
45 |
28 |
if (defined $value) |
|
306
|
0 |
45 |
if ref $value |
|
311
|
3 |
42 |
if ($diff > 0) |
|
321
|
0 |
73 |
if $self->force_flush and not defined $self->{'_meta'}{$name} |
|
324
|
8 |
65 |
if $self->force_flush |
|
352
|
0 |
0 |
unless $self->seq |
|
357
|
0 |
0 |
if $s eq $Bio::Seq::Meta::META_GAP and $s ne $m |
|
451
|
0 |
8 |
unless $start =~ /^[+]?\d+$/ and $start > 0 |
|
454
|
3 |
5 |
if ($value) { } |
|
456
|
0 |
3 |
if $start > length $self->seq |
|
461
|
0 |
3 |
unless defined $self->{'_meta'}{$name} |
|
462
|
1 |
2 |
if (length $self->{'_meta'}{$name} < $start) |
|
468
|
2 |
1 |
if length $self->{'_meta'}{$name} >= $start - 1 + length($value) |
|
477
|
2 |
3 |
unless $end |
|
480
|
0 |
5 |
if (length $self->{'_meta'}{$name} < $end) |
|
523
|
18 |
56 |
unless $_ eq $Bio::Seq::Meta::DEFAULT_NAME |
|
525
|
12 |
45 |
if $self->{'_meta'}{$Bio::Seq::Meta::DEFAULT_NAME} |
|
580
|
6 |
149 |
if (defined $value) |
|
581
|
4 |
2 |
if ($value) { } |
|
611
|
6 |
16 |
if ($self->length > $self->named_meta_length($name)) { } |
|
|
2 |
14 |
elsif ($self->length < $self->named_meta_length($name)) { } |
|
641
|
0 |
3 |
if $self->force_flush |
|
646
|
0 |
3 |
if ($name) { } |
|
647
|
0 |
0 |
if $self->length != $self->named_meta_length($name) |
|
650
|
0 |
1 |
if $self->named_meta_length($m) > 0 and $self->length != $self->named_meta_length($m) |
|
654
|
0 |
3 |
if ($sticky) |
|
655
|
0 |
0 |
if $self->verbose |
|
682
|
0 |
2 |
unless $self->is_flush |
|
706
|
0 |
1 |
unless $start =~ /^[+]?\d+$/ and $start > 0 |
|
708
|
0 |
1 |
unless $end =~ /^[+]?\d+$/ and $end > 0 |
|
710
|
0 |
1 |
unless $end >= $start |
|
712
|
0 |
1 |
unless $end <= $self->length |