| Bio/PrimarySeq.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| condition | 28 | 32 | 87.5 |
| line | !l | l&&!r | l&&r | condition |
|---|---|---|---|---|
| 207 | 12749 | 2240 | 6 | defined $id and defined $given_id |
| 286 | 170 | 2 | 27281 | not $self->{'_direct'} and defined $$seq_str_ref |
| 293 | 14650 | 2 | 12798 | exists $self->{'seq'} && $len > 0 |
| 335 | 1 | 23089 | 8 | defined $seqstr and not $seqstr =~ /^[$MATCHPATTERN]*$/ |
| 385 | 9986 | 0 | 52 | ref $start and $start->isa('Bio::LocationI') |
| 0 | 0 | 9986 | defined $start and defined $end | |
| 498 | 3 | 1 | 1 | $len and $len != $val |
| line | l | !l | condition |
|---|---|---|---|
| 223 | 187 | 14808 | $len || 0 |
| 292 | 27436 | 14 | $$seq_str_ref || '' |
| 338 | 0 | 3 | defined $self->id || '[unidentified sequence]' |
| 790 | 526 | 1 | $self->{'namespace'} || '' |
| line | l | !l&&r | !l&&!r | condition |
|---|---|---|---|---|
| 302 | 12780 | 3000 | 11652 | $is_changed_seq or not defined $self->alphabet |