| Bio/AlignIO.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| condition | 11 | 25 | 44.0 |
| line | l | !l | condition |
|---|---|---|---|
| 510 | 28 | 0 | $self->{'alignio'}->next_aln || undef |
| 537 | 0 | 4 | $self->{'_force_displayname_flat'} || 0 |
| line | l | !l&&r | !l&&!r | condition |
|---|---|---|---|---|
| 305 | 0 | 338 | 0 | ref $caller || $caller |
| 318 | 144 | 17 | 8 | $param{'-format'} || $class->_guess_format($param{-'file'} || $ARGV[0]) |
| 321 | 8 | 0 | 0 | $param{-'file'} || $ARGV[0] |
| 324 | 0 | 0 | 0 | $param{-'fh'} || $ARGV[0] |
| 372 | 56 | 0 | 0 | ref $self || $self |
| 556 | 2 | 2 | 0 | $value eq 'rna' or $value eq 'protein' |
| 4 | 0 | 0 | $value eq 'rna' or $value eq 'protein' or $value eq 'dna' |