| line |
count |
pod |
subroutine |
|
96
|
49 |
n/a |
BEGIN |
|
99
|
49 |
n/a |
BEGIN |
|
121
|
0 |
Yes |
add_seq |
|
136
|
0 |
Yes |
remove_seq |
|
159
|
0 |
Yes |
purge |
|
178
|
0 |
Yes |
sort_alphabetically |
|
197
|
0 |
Yes |
each_seq |
|
217
|
0 |
Yes |
each_alphabetically |
|
237
|
0 |
Yes |
each_seq_with_id |
|
257
|
0 |
Yes |
get_seq_by_pos |
|
283
|
0 |
Yes |
select |
|
304
|
0 |
Yes |
select_noncont |
|
327
|
0 |
Yes |
slice |
|
357
|
0 |
Yes |
map_chars |
|
372
|
0 |
Yes |
uppercase |
|
389
|
0 |
Yes |
match_line |
|
414
|
0 |
Yes |
match |
|
432
|
0 |
Yes |
unmatch |
|
456
|
0 |
Yes |
id |
|
473
|
0 |
Yes |
missing_char |
|
488
|
0 |
Yes |
match_char |
|
503
|
0 |
Yes |
gap_char |
|
518
|
0 |
Yes |
symbol_chars |
|
542
|
0 |
Yes |
consensus_string |
|
569
|
0 |
Yes |
consensus_iupac |
|
589
|
0 |
Yes |
is_flush |
|
605
|
0 |
Yes |
length |
|
624
|
0 |
Yes |
maxname_length |
|
640
|
0 |
Yes |
num_residues |
|
656
|
0 |
Yes |
num_sequences |
|
672
|
0 |
Yes |
percentage_identity |
|
688
|
0 |
Yes |
overall_percentage_identity |
|
705
|
0 |
Yes |
average_percentage_identity |
|
758
|
0 |
Yes |
column_from_residue_number |
|
781
|
0 |
Yes |
displayname |
|
800
|
0 |
Yes |
set_displayname_count |
|
816
|
0 |
Yes |
set_displayname_flat |
|
831
|
0 |
Yes |
set_displayname_normal |
|
850
|
0 |
Yes |
no_residues |
|
866
|
0 |
Yes |
no_sequences |