| line |
true |
false |
branch |
|
112
|
0 |
9 |
defined $hdr ? : |
|
113
|
0 |
9 |
defined $trans ? : |
|
129
|
9 |
30 |
unless ($self->{'_parsed'}) |
|
146
|
0 |
9 |
if /^\s+$/ |
|
149
|
0 |
9 |
unless defined $_ |
|
151
|
0 |
9 |
unless (/^\#NEXUS/i) |
|
163
|
0 |
13 |
if ($self->verbose > 0) { } |
|
172
|
13 |
0 |
if ($s =~ /begin trees;(.+)(end;)?/is) { } |
|
174
|
12 |
1 |
if ($trees =~ s/\s+translate\s+([^;]+);//i) { } |
|
182
|
158 |
0 |
if ($n =~ /^\s*(\S+)\s+(.+)$/) |
|
210
|
37 |
0 |
if defined $tree_name |
|
218
|
0 |
9 |
if (not @sections) |
|
236
|
0 |
0 |
if ($self->header) |
|
246
|
0 |
0 |
if ($first == 0 and $translate) |
|
263
|
0 |
0 |
unless ($data[-1] =~ /\)$/) |
|
271
|
0 |
0 |
$tree->get_root_node ? : |
|
281
|
0 |
0 |
if $self->_flush_on_write and defined $self->_fh |
|
287
|
0 |
0 |
unless defined $node |
|
293
|
0 |
0 |
if (@data > 1) { } |
|
299
|
0 |
0 |
if $node->has_tag('color') or $node->has_tag('label') |
|
302
|
0 |
0 |
if defined $comment_flag |
|
304
|
0 |
0 |
if ($node->has_tag('color')) |
|
309
|
0 |
0 |
if ($node->has_tag('label')) |
|
311
|
0 |
0 |
if $comment_flag |
|
314
|
0 |
0 |
if defined $comment_flag |
|
321
|
0 |
0 |
if (not defined $bl) { } |
|
|
0 |
0 |
elsif ($bl =~ /\#/) { } |
|
329
|
0 |
0 |
if (defined($b = $node->bootstrap)) { } |
|
|
0 |
0 |
elsif (defined($b = $node->id)) { } |
|
333
|
0 |
0 |
if $node2num->{$b} |
|
334
|
0 |
0 |
if defined $b |
|
339
|
0 |
0 |
if (defined $node->id or defined $node->branch_length) |
|
340
|
0 |
0 |
defined $node->id ? : |
|
341
|
0 |
0 |
if (length $id and $node2num->{$id}) |
|
344
|
0 |
0 |
if ($node->has_tag('color')) |
|
348
|
0 |
0 |
defined $node->branch_length ? : |
|
374
|
9 |
0 |
if @_ |
|
393
|
9 |
0 |
if @_ |