blib/lib/Bio/Translator/Table.pm | |||
---|---|---|---|
Criterion | Covered | Total | % |
condition | 12 | 18 | 66.6 |
line | l | !l | condition |
---|---|---|---|
255 | 0 | 0 | carp('Translation table is in invalid format') and return |
line | !l | l&&!r | l&&r | condition |
---|---|---|---|---|
461 | 5114 | 894 | 458 | defined $Bio::Translator::Table::ambiguous_forward{$residue} and defined $Bio::Translator::Table::ambiguous_forward{$consensus} |
6008 | 360 | 98 | defined $Bio::Translator::Table::ambiguous_forward{$residue} and defined $Bio::Translator::Table::ambiguous_forward{$consensus} and $Bio::Translator::Table::ambiguous_forward{$residue} eq $Bio::Translator::Table::ambiguous_forward{$consensus} |
line | l | !l | condition |
---|---|---|---|
611 | 1650 | 200 | $$self[0]{$residue} ||= [] |
612 | 1650 | 200 | $$self[1]{$residue} ||= [] |
line | l | !l&&r | !l&&!r | condition |
---|---|---|---|---|
600 | 1850 | 0 | 0 | $reverse ||= ${reverse_complement($codon);} |
609 | 1850 | 0 | 0 | $reverse ||= ${reverse_complement($codon);} |