| lib/Bio/Tradis/Parser/Cigar.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 9 | 12 | 75.0 |
| line | true | false | branch |
|---|---|---|---|
| 22 | 19 | 0 | if ($cigar_item =~ /(\d+)([MIDNSHP=X])/) |
| 27 | 11 | 8 | if ($action eq 'M' or $action eq 'X' or $action eq '=') { } |
| 6 | 2 | elsif ($action eq 'S' or $action eq 'D' or $action eq 'N') { } | |
| 2 | 0 | elsif ($action eq 'I') { } | |
| 29 | 7 | 4 | if $results{'start'} == 0 |
| 31 | 11 | 0 | if $results{'end'} < $current_coordinate |