| line |
count |
pod |
subroutine |
|
836
|
3 |
n/a |
BEGIN |
|
838
|
3 |
n/a |
BEGIN |
|
839
|
3 |
n/a |
BEGIN |
|
840
|
3 |
n/a |
BEGIN |
|
841
|
3 |
n/a |
BEGIN |
|
842
|
3 |
n/a |
BEGIN |
|
843
|
3 |
n/a |
BEGIN |
|
968
|
0 |
Yes |
use_bam_adapter |
|
975
|
0 |
Yes |
use_big_adapter |
|
982
|
8 |
Yes |
open_db_connection |
|
1325
|
0 |
Yes |
get_db_name |
|
1358
|
0 |
Yes |
get_dataset_list |
|
1433
|
1 |
Yes |
verify_or_request_feature_types |
|
1709
|
0 |
Yes |
check_dataset_for_rpm_support |
|
1770
|
0 |
Yes |
get_new_feature_list |
|
1856
|
1 |
Yes |
get_new_genome_list |
|
1905
|
0 |
n/a |
__ANON__ |
|
1949
|
0 |
Yes |
get_db_feature |
|
2076
|
12 |
Yes |
get_segment_score |
|
2121
|
7 |
Yes |
calculate_score |
|
2135
|
2 |
Yes |
get_chromosome_list |
|
2308
|
0 |
Yes |
low_level_bam_fetch |
|
2333
|
0 |
Yes |
low_level_bam_coverage |
|
2358
|
0 |
Yes |
get_genomic_sequence |
|
2385
|
0 |
No |
validate_included_feature |
|
2393
|
9 |
n/a |
_lookup_db_method |
|
2573
|
1 |
n/a |
_load_helper_module |
|
2585
|
0 |
n/a |
_load_bam_helper_module |
|
2623
|
0 |
n/a |
_load_bigwig_helper_module |
|
2663
|
0 |
n/a |
_load_bigbed_helper_module |