| line |
!l |
l&&!r |
l&&r |
condition |
|
533
|
0 |
0 |
0 |
defined $seq_id and $start =~ /^\d+$/ |
|
|
0 |
0 |
0 |
defined $seq_id and $start =~ /^\d+$/ and $stop =~ /^\d+$/ |
|
897
|
4 |
0 |
0 |
$chrom and $start |
|
|
4 |
0 |
0 |
$chrom and $start and $end |
|
899
|
0 |
0 |
0 |
$g->strand == $strand and not $g->start > $end || $g->end < $start |
|
968
|
0 |
0 |
4 |
$self->do_gene and not $self->typelist =~ /gene/i |
|
998
|
99 |
0 |
0 |
not $self->do_gene and $feature->primary_tag =~ /rna|transcript/i |
|
1043
|
100 |
178 |
0 |
$fields->[2] eq 'exon' and $group =~ /exon_id "([^"]+)";?/i |
|
1048
|
0 |
278 |
0 |
$self->do_gene and not exists $self->{'loaded'}{$gene_id} |
|
1125
|
0 |
0 |
0 |
$fields->[2] eq 'exon' and exists $attributes{'exon_id'} |
|
1132
|
0 |
0 |
0 |
$gene_id and not exists $self->{'loaded'}{$gene_id} |
|
1141
|
0 |
0 |
0 |
$transcript_id and not exists $self->{'loaded'}{$transcript_id} |
|
1169
|
0 |
0 |
2 |
$gene_id and not exists $self->{'loaded'}{$gene_id} |
|
1209
|
0 |
0 |
0 |
$tag and $value |