| blib/lib/Bio/SSRTool.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 13 | 18 | 72.2 |
| line | true | false | branch |
|---|---|---|---|
| 64 | 0 | 3 | unless my $seq = shift() |
| 69 | 0 | 3 | unless ($motif_len =~ /^\d{1,2}$/ and $motif_len > 0 and $motif_len < 11) |
| 78 | 2 | 1 | if (ref $seq ne 'GLOB') |
| 79 | 1 | 1 | if (not $seq =~ /\n$/ and -e $seq) { } |
| 81 | 0 | 1 | unless open my $fh, '<', $tmp |
| 94 | 3 | 6 | unless $rec |
| 96 | 0 | 6 | unless $sequence and $titleline |
| 115 | 6 | 12 | if _homopolymer($motif, $len) |
| 124 | 12 | 0 | unless ($locations{$start}++) |