| line |
true |
false |
branch |
|
162
|
0 |
14 |
if ($class ne $pkg) |
|
190
|
0 |
14 |
exists $ENV{'TMPDIR'} ? : |
|
192
|
0 |
14 |
if (exists $ENV{'USER'}) |
|
208
|
6 |
8 |
if (not $$self{'DEBUG'} and $$self{'TMP_CREATED'} and $$self{'STATE'} eq 'calculated') |
|
287
|
0 |
112 |
unless $type |
|
288
|
0 |
112 |
unless $type =~ /^$pkg$/ |
|
292
|
0 |
112 |
if (not exists $component{$name}) { } |
|
|
0 |
112 |
elsif (not exists $$self{$name}) { } |
|
|
112 |
0 |
elsif (defined $_[0]) { } |
|
302
|
0 |
112 |
if ($name eq 'MULTIPLE' and $$self{'MULTIPLE'} <= 1) |
|
306
|
0 |
112 |
if ($name eq 'LDOSE' and $$self{'LDOSE'} <= 0) |
|
310
|
0 |
112 |
if ($name eq 'HDOSE' and $$self{'HDOSE'} <= $$self{'LDOSE'}) |
|
314
|
0 |
112 |
if ($name eq 'STEP' and $$self{'STEP'} <= 0) |
|
318
|
0 |
14 |
if ($name eq 'MAXPROC' and $$self{'MAXPROC'} > 64 || $$self{'MAXPROC'} < 1) |
|
322
|
0 |
14 |
if ($name eq 'TRIM' and $$self{'TRIM'} < 0 || $$self{'TRIM'} > 1) |
|
327
|
0 |
14 |
if ($name eq 'SIGNIFICANCE' and $$self{'SIGNIFICANCE'} <= 0 || $$self{'SIGNIFICANCE'} >= 1) |
|
345
|
0 |
14 |
if (scalar @_ == 0) { } |
|
353
|
0 |
125 |
if ($dose < $dose1) |
|
377
|
0 |
275 |
if (exists $$self{'RESPONSES'}{$assay}) |
|
381
|
0 |
275 |
if (scalar @{$$self{'DOSES'};} == 0) |
|
386
|
0 |
275 |
if ($nresp != $ndoses) |
|
410
|
0 |
14 |
if $$self{'STATE'} eq 'calculated' |
|
439
|
0 |
275 |
if $count >= $assayNum |
|
447
|
36 |
8 |
if ($pid = fork) { } |
|
|
8 |
0 |
elsif (defined $pid) { } |
|
448
|
0 |
36 |
if $$self{'DEBUG'} |
|
454
|
0 |
8 |
unless open ECOUT, ">$file" |
|
465
|
9840 |
1144 |
if ($dose - $last_dose > $$self{'STEP'}) |
|
468
|
2746 |
8238 |
if ($icount++ % $$self{'MAXPROC'} == $iproc) |
|
483
|
0 |
24 |
if ($? != 0) |
|
499
|
0 |
24 |
unless open IN, "<$infile" |
|
506
|
207323 |
0 |
if (defined $expressedAssays{$assay}) |
|
518
|
0 |
745135 |
unless $fs{$b} <=> $fs{$a} |
|
521
|
0 |
207323 |
if ($fs{$assay} < 0) { } |
|
546
|
111 |
40 |
if ($max >= $$self{'CUTOFF'}) { } |
|
554
|
0 |
151 |
if ($max <= 0) { } |
|
563
|
11 |
140 |
if ($d >= 0) { } |
|
564
|
10 |
1 |
if ($a != 0) { } |
|
570
|
140 |
0 |
if ($a != 0) { } |
|
624
|
0 |
6865 |
if ($$self{'STATE'} ne 'calculated') |
|
628
|
0 |
6865 |
if (not defined $dose) { } |
|
632
|
0 |
6865 |
if (not exists $$self{'SORTED_DATA'}{$dose}) { } |
|
653
|
0 |
6865 |
if ($$self{'STATE'} ne 'calculated') |
|
657
|
0 |
6865 |
if (not defined $dose) { } |
|
661
|
0 |
6865 |
if (not exists $$self{'PVAL_DATA'}{$dose}) { } |
|
706
|
1812 |
0 |
unless defined $precision |
|
707
|
0 |
1812 |
if ($$self{'STATE'} ne 'calculated') |
|
710
|
0 |
1812 |
if (not defined $assay) { } |
|
714
|
0 |
1812 |
unless (exists $$self{'EC50DATA'}{$assay}) |
|
719
|
0 |
1812 |
if (not defined $property) { } |
|
723
|
0 |
1812 |
if (not exists $$assaydata{$property}) { } |
|
729
|
1394 |
418 |
if ($ret ne '' and $ret != int $ret) |
|
740
|
0 |
14 |
if (-d $$self{'TMPDIR'} and -w $$self{'TMPDIR'}) |
|
743
|
0 |
14 |
if (-d $$self{'TMPDIR'}) |
|
746
|
0 |
14 |
if (-w $$self{'TMPDIR'}) |
|
747
|
0 |
0 |
unless unlink $$self{'TMPDIR'} |
|
766
|
111 |
152292 |
if $dose == $ec50 |
|
767
|
99063 |
53340 |
if ($current >= $$self{'CUTOFF'}) { } |
|
769
|
111 |
98952 |
if $off_flag == 1 |
|
771
|
55 |
53285 |
if ($seen == 1) |
|
776
|
55 |
53285 |
if ($off_flag == 0) |
|
782
|
56 |
55 |
if $seen == 1 |
|
783
|
56 |
55 |
if $current >= $$self{'CUTOFF'} |
|
792
|
111 |
0 |
if (@$range >= 2) { } |
|
816
|
0 |
42563 |
if ($best_sse == 0 or $n == 0) { } |
|
856
|
68 |
482 |
if $stdev eq 'NaN' or $stdev < $cutoff |
|
860
|
5 |
545 |
if ($step == 0) |
|
864
|
275 |
275 |
if ($pam eq 'a') { } |
|
|
275 |
0 |
elsif ($pam eq 'b') { } |
|
867
|
32 |
243 |
if $l <= 0 |
|
874
|
131 |
144 |
if $l <= 0 |
|
897
|
0 |
20 |
if (defined $echo and $echo) |
|
901
|
0 |
20 |
if ($status != 0) |
|
912
|
0 |
0 |
if (substr($mesg, -1, 1) ne "\n") |