| lib/Bio/Roary/Output/GroupsMultifastaNucleotide.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 5 | 18 | 27.7 |
| line | true | false | branch |
|---|---|---|---|
| 55 | 0 | 0 | if ($self->annotate_groups->_ids_to_groups->{$input_seq->display_id}) |
| 60 | 0 | 0 | unless (defined $self->pan_reference_groups_seen->{$current_group}) |
| 63 | 0 | 0 | $gene_name ? : |
| 69 | 0 | 0 | if $self->dont_delete_files == 0 and $number_of_genes < $self->core_definition * $self->number_of_gff_files |
| 120 | 1 | 270 | if ($line =~ /^>/) |
| 125 | 252 | 19 | if ($at_sequence == 1) |
| 163 | 1 | 0 | unless -e $infile |
| 169 | 0 | 0 | if $line =~ /^>/ |
| 171 | 0 | 0 | if ($line =~ /^(>[^:]+)/) |