| lib/Bio/Roary/CommandLine/ParallelAllAgainstAllBlastp.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 20 | 26 | 76.9 |
| line | true | false | branch |
|---|---|---|---|
| 44 | 1 | 2 | if (@{$self->args;} == 0) |
| 48 | 0 | 3 | if (defined $verbose) |
| 52 | 1 | 2 | if defined $help |
| 53 | 1 | 2 | if defined $output_filename |
| 54 | 2 | 1 | if defined $makeblastdb_exec |
| 55 | 2 | 1 | if defined $blastp_exec |
| 56 | 2 | 1 | if defined $job_runner |
| 57 | 0 | 3 | if defined $cpus |
| 58 | 0 | 3 | if ($self->cpus > 1) |
| 63 | 0 | 2 | unless (-e $filename) |
| 75 | 1 | 2 | if $self->help |
| 76 | 0 | 2 | if (defined $self->_error_message) |
| 86 | 0 | 2 | if (@{$self->fasta_files;} > 1) { } |