| line |
true |
false |
branch |
|
30
|
0 |
0 |
ref $reference_to_validate eq 'SCALAR' ? : |
|
35
|
0 |
0 |
length $$reference_to_validate == $valid_length ? : |
|
40
|
0 |
0 |
$$reference_to_validate =~ /^[ACTGactg]+$/ ? : |
|
48
|
0 |
0 |
if ($splice_site_type == 5) { } |
|
|
0 |
0 |
elsif ($splice_site_type == 3) { } |
|
64
|
0 |
0 |
exists $$Bio::RNA::SpliceSites::Scoring::SpliceModels::splice5sequences::table{$outer_portion} ? : |
|
70
|
0 |
0 |
exists $$Bio::RNA::SpliceSites::Scoring::SpliceModels::me2x5::table[$sequence_matrix_value] ? : |
|
79
|
0 |
0 |
if ($type == 5) { } |
|
|
0 |
0 |
elsif ($type == 3) { } |
|
80
|
0 |
0 |
if $dinucleotide eq 'GT' |
|
100
|
0 |
0 |
unless (is_scalar_reference($sequence_reference)) |
|
104
|
0 |
0 |
unless (is_kmer($sequence_reference, 9)) |
|
108
|
0 |
0 |
unless (is_genetic_alphabet($sequence_reference)) |
|
156
|
0 |
0 |
unless (is_scalar_reference($sequence_reference)) |
|
160
|
0 |
0 |
unless (is_kmer($sequence_reference, 23)) |
|
164
|
0 |
0 |
unless (is_genetic_alphabet($sequence_reference)) |