| line |
true |
false |
branch |
|
31
|
0 |
556 |
if (@_)
|
|
34
|
0 |
0 |
if ($key =~ qr/^VERBOSE$/i) { }
|
|
|
0 |
0 |
elsif ($key =~ qr/^COMPAT$/i) { }
|
|
145
|
0 |
13384 |
if (my $reference = ref $class)
|
|
162
|
2950 |
10434 |
if (@_ and @_ = &looks_like_hash(@_))
|
|
177
|
0 |
5804 |
if ($key eq '-verbose')
|
|
197
|
0 |
5804 |
if ($@)
|
|
198
|
0 |
0 |
if (&blessed($@) and $@->can('rethrow')) { }
|
|
|
0 |
0 |
elsif (not ref $@ and $@ =~ /^Can't locate object method /) { }
|
|
218
|
12548 |
836 |
if (ref $self ne 'Bio::Phylo::NeXML::Writable' and not $self->isa('Bio::Phylo::Matrices::Datatype'))
|
|
250
|
0 |
109 |
if (defined $guid) { }
|
|
275
|
2 |
109 |
if (defined $desc) { }
|
|
303
|
0 |
109 |
if (defined $score) { }
|
|
304
|
0 |
0 |
unless (&looks_like_number($score))
|
|
349
|
1664 |
577 |
unless (defined $generic{$id} and @_)
|
|
354
|
2241 |
0 |
if (@_)
|
|
358
|
128 |
2113 |
if (scalar @_ == 1 and &looks_like_instance($_[0], 'HASH')) { }
|
|
458
|
64 |
2996 |
unless (defined $generic{$id})
|
|
463
|
2951 |
109 |
if (defined $key) { }
|
|
465
|
0 |
2951 |
if (ref $key eq 'ARRAY') { }
|
|
555
|
6 |
103 |
unless defined $deep
|
|
566
|
108 |
1 |
if ($deep)
|
|
575
|
115 |
0 |
unless ($seen{$setter_name})
|
|
582
|
30 |
85 |
if (ref $output eq 'ARRAY') { }
|
|
|
56 |
58 |
elsif ($output and ref $output) { }
|
|
584
|
43 |
80 |
ref $_ ? :
|
|
603
|
1737 |
115 |
unless ($seen{$setter_name})
|
|
653
|
13384 |
0 |
if (defined($id = $self->get_id))
|
|
665
|
87137 |
37067 |
if ($class->can($cleanup))
|
|
686
|
13384 |
0 |
if (defined $id)
|
|
733
|
19943 |
0 |
if (&blessed($container)) { }
|
|
734
|
19943 |
0 |
if ($container->can('can_contain')) { }
|
|
735
|
19943 |
0 |
if ($container->can_contain($self)) { }
|
|
736
|
19943 |
0 |
if ($container->contains($self)) { }
|
|
774
|
0 |
0 |
if &looks_like_class('JSON')
|
|
779
|
0 |
0 |
if $self->get_guid
|
|
780
|
0 |
0 |
if $self->get_desc
|
|
781
|
0 |
0 |
if $self->get_score
|