| line |
!l |
l&&!r |
l&&r |
condition |
|
90
|
0 |
0 |
0 |
$node->$field and $node->$field eq $value
|
|
|
0 |
0 |
0 |
$args{'-order'} and $args{'-order'} =~ /^b/
|
|
119
|
0 |
0 |
0 |
&blessed($bptree) and $bptree->isa('Bio::Tree::TreeI')
|
|
203
|
220 |
0 |
1864 |
$firstp and $nextp
|
|
|
220 |
1749 |
115 |
$firstp and $nextp and $firstp == $nextp
|
|
557
|
4 |
0 |
1 |
$is_taxa and not $@
|
|
591
|
0 |
0 |
0 |
$nodes && @{$nodes;}
|
|
643
|
18 |
14 |
1 |
$count != 0 and $count != 2
|
|
803
|
3 |
0 |
0 |
$is_taxa and not $@
|
|
809
|
0 |
0 |
3 |
$is_node_array and not $@
|
|
977
|
360 |
46 |
265 |
@children and $node->get_parent
|
|
2047
|
0 |
0 |
0 |
$previous and $index->is_terminal
|
|
2560
|
0 |
0 |
0 |
&looks_like_class('Statistics::R') and &looks_like_class('Bio::Phylo::Generator')
|
|
2932
|
223 |
2 |
12 |
scalar @children == 1 and $seen{$nid} > 0
|
|
2936
|
4 |
2 |
6 |
defined $cbl and defined $bl
|
|
2965
|
3 |
14 |
0 |
$bl and $bl < 0
|
|
3216
|
532 |
26 |
0 |
$node->is_root and 1 == @children
|
|
3484
|
0 |
0 |
0 |
defined $length and not $length =~ /^[+-]?\d+$/
|
|
3540
|
0 |
0 |
0 |
defined $length and not $length =~ /^[+-]?\d+$/
|
| line |
l |
!l |
condition |
|
678
|
42 |
2 |
shift() || 0
|
|
685
|
750 |
46 |
$node->get_branch_length || 0
|
|
689
|
5 |
39 |
$node->get_branch_length || 0
|
|
920
|
5 |
0 |
$tuple->[0] || 0
|
|
|
5 |
0 |
$tuple->[1] || 0
|
|
992
|
225 |
40 |
$node->get_branch_length || 0
|
|
1024
|
112 |
16 |
$lengths_other{$split} || 0
|
|
1060
|
570 |
58 |
(shift())->get_branch_length || 0
|
|
1847
|
0 |
0 |
$terminal->get_branch_length || 0
|
|
1900
|
0 |
0 |
$terminal->get_branch_length || 0
|
|
1901
|
0 |
0 |
$terminal->get_children || []
|
|
1902
|
0 |
0 |
@$children || 1
|
|
2039
|
0 |
0 |
$previous ||= ''
|
|
2050
|
0 |
0 |
$index->get_parent || ''
|
|
2052
|
0 |
0 |
$index->get_children || []
|
|
2360
|
20 |
24 |
$node->get_generic('age') || 0
|
|
2397
|
0 |
0 |
$times[-1] || 0
|
|
2582
|
0 |
0 |
$args{'-trees'} || 1
|
|
2742
|
0 |
0 |
$args{'-delim'} || ' '
|