| blib/lib/Bio/Phylo/Parsers/Fastq.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 14 | 22 | 63.6 |
| line | true | false | branch |
|---|---|---|---|
| 49 | 0 | 1 | unless my $type = $self->_args->{'-type'} |
| 52 | 0 | 1 | unless $self->_flush |
| 60 | 584 | 1752 | if ($line =~ /^\@(.+)$/ and not $readphred) { } |
| 584 | 1168 | elsif ($line =~ /^\+/ and not $readphred) { } | |
| 584 | 584 | elsif ($readseq) { } | |
| 584 | 0 | elsif ($readphred) { } | |
| 64 | 583 | 0 | if ($id and $seq and $phred) |
| 100 | 584 | 0 | if (length $phred == length $seq) |
| 117 | 1 | 0 | $self->_flush ? : |
| 137 | 584 | 0 | if $sh |
| 138 | 0 | 584 | unless $self->_flush |