| line |
true |
false |
branch |
|
30
|
179 |
60 |
if (@_) |
|
42
|
179 |
60 |
if (@_) |
|
54
|
179 |
91 |
if (@_) |
|
66
|
179 |
60 |
if (@_) |
|
78
|
179 |
60 |
if (@_) |
|
90
|
179 |
62 |
if (@_) |
|
102
|
295 |
490 |
if (@_) |
|
114
|
295 |
490 |
if (@_) |
|
126
|
295 |
490 |
if (@_) |
|
138
|
175 |
60 |
if (@_) |
|
150
|
175 |
60 |
if (@_) |
|
162
|
0 |
0 |
if (@_) |
|
174
|
0 |
0 |
if (@_) |
|
188
|
0 |
3 |
if $n != 2 |
|
203
|
0 |
1 |
if $n != 3 |
|
224
|
0 |
1 |
if $n != 4 |
|
266
|
1 |
0 |
if $dot2 < 0 |
|
299
|
0 |
421 |
unless $n == 1 |
|
309
|
0 |
176 |
unless $n == 1 |
|
311
|
175 |
1 |
if ref $object eq 'Bio::PDB::Structure::Atom' |
|
312
|
1 |
175 |
if (ref $object eq 'Bio::PDB::Structure::Molecule') |
|
328
|
0 |
1 |
unless open CMDFPDB, "<$fname" |
|
332
|
2 |
58 |
if /^END/u |
|
358
|
0 |
6 |
unless @_ |
|
360
|
0 |
6 |
if @_ |
|
361
|
0 |
6 |
unless open FPDB, "<$fname" |
|
362
|
0 |
6 |
if ($record > 0) |
|
367
|
0 |
0 |
if (/^END/u) |
|
369
|
0 |
0 |
if $rcount == $record |
|
376
|
6 |
174 |
if /^END/u |
|
377
|
0 |
174 |
unless /^ATOM |^HETATM /u |
|
385
|
0 |
174 |
if $chain eq '' |
|
389
|
0 |
174 |
unless $coor =~ /\d/u |
|
391
|
0 |
174 |
unless $beta =~ /\d/u |
|
405
|
0 |
174 |
if $altloc ne ' ' |
|
406
|
0 |
174 |
if $icode ne ' ' |
|
564
|
2 |
0 |
if ($n == 0) { } |
|
571
|
0 |
0 |
unless open OFIL, ">>$_[0]" |
|
592
|
58 |
0 |
if defined $atom_name{$aname} |
|
597
|
0 |
2 |
if $n >= 1 |
|
616
|
3 |
0 |
if $nrd > 0 |
|
617
|
3 |
0 |
if $nrd > 0 |
|
618
|
3 |
0 |
if $nrd > 0 |
|
675
|
0 |
29 |
if defined $mass2{$aname} |
|
676
|
29 |
0 |
unless ($match) |
|
680
|
29 |
80 |
if ($aname =~ /$ii/u) |
|
688
|
29 |
0 |
if ($match == 1) { } |
|
|
0 |
0 |
elsif ($match == 2) { } |
|
706
|
1 |
0 |
if $tmass > 0 |
|
707
|
1 |
0 |
if $tmass > 0 |
|
708
|
1 |
0 |
if $tmass > 0 |
|
728
|
0 |
2 |
unless $n == 3 |
|
750
|
0 |
2 |
unless $n == 9 |
|
788
|
0 |
1 |
unless $n == 12 |
|
811
|
0 |
1 |
unless $n == 1 |
|
824
|
0 |
1 |
unless $nrd1 == $nrd2 |
|
930
|
0 |
1 |
unless $n == 1 |
|
937
|
0 |
1 |
unless $nrd1 == $nrd2 |
|
949
|
1 |
0 |
if $nrd1 > 0 |
|
963
|
0 |
0 |
if $iatom->type eq 'ATOM' |
|
976
|
0 |
0 |
if $iatom->type eq 'HETATM' |
|
989
|
0 |
0 |
if $iatom->type eq 'ATOM' and $iatom->name eq 'CA' |
|
1003
|
0 |
0 |
if $iatom->type ne 'ATOM' |
|
1005
|
0 |
0 |
if grep /^$name$/u, @batoms |
|
1019
|
0 |
0 |
if $iatom->type ne 'ATOM' |
|
1021
|
0 |
0 |
unless grep /^$name$/u, @batoms |
|
1032
|
0 |
0 |
if $ni != 1 |
|
1089
|
0 |
0 |
if $@ |
|
1093
|
0 |
0 |
if eval $logic |
|
1136
|
1 |
4 |
if $onorm / $dnorm <= 1e-12 |
|
1142
|
24 |
0 |
if (abs $b > 0) |
|
1145
|
2 |
22 |
if (abs($dma) + abs($b) <= abs $dma) { } |
|
1153
|
5 |
17 |
if $q < 0 |
|
1197
|
2 |
4 |
if ($d[$i] < $dtemp) |
|
1204
|
2 |
1 |
if ($k > $j) |