| line |
true |
false |
branch |
|
27
|
0 |
0 |
if defined $self->sequence_type
|
|
29
|
0 |
0 |
if defined $self->nearest_sequence_type
|
|
36
|
0 |
8 |
unless open my $fh, $self->profiles_filename
|
|
73
|
2 |
121 |
if ($number_a eq $number_b) { }
|
|
|
1 |
120 |
elsif ("$number_a~" eq $number_b) { }
|
|
|
18 |
102 |
elsif ("$number_b~" eq $number_a) { }
|
|
92
|
22 |
28 |
if is_metadata($header_row[$i]) == 1
|
|
106
|
0 |
299 |
unless defined $header_row[$col]
|
|
107
|
89 |
210 |
if is_metadata($header_row[$col]) == 1
|
|
108
|
28 |
182 |
if $row == 1
|
|
111
|
18 |
192 |
unless defined $allele_number
|
|
112
|
75 |
117 |
if ($allele_number eq $current_row[$col]) { }
|
|
|
17 |
100 |
elsif ($self->_allele_numbers_similar($allele_number, $current_row[$col])) { }
|
|
140
|
2 |
25 |
if ($freq == $num_loci)
|
|
145
|
2 |
4 |
if ($self->report_lowest_st) { }
|
|
154
|
6 |
6 |
if ($st_nearest_match_freq{$a} > $st_nearest_match_freq{$b}) { }
|
|
|
3 |
3 |
elsif ($st_nearest_match_freq{$a} < $st_nearest_match_freq{$b}) { }
|