| lib/Bio/Graphics/Wiggle.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 48 | 65 | 73.8 |
| pod | 18 | 40 | 45.0 |
| line | count | pod | subroutine |
|---|---|---|---|
| 222 | 1 | n/a | BEGIN |
| 223 | 1 | n/a | BEGIN |
| 224 | 1 | n/a | BEGIN |
| 225 | 1 | n/a | BEGIN |
| 227 | 1 | n/a | BEGIN |
| 229 | 1 | n/a | BEGIN |
| 230 | 1 | n/a | BEGIN |
| 231 | 1 | n/a | BEGIN |
| 232 | 1 | n/a | BEGIN |
| 233 | 1 | n/a | BEGIN |
| 237 | 2 | Yes | new |
| 274 | 2 | No | new_fh |
| 281 | 4 | No | end |
| 291 | 2 | n/a | DESTROY |
| 294 | 0 | No | erase |
| 298 | 7631 | No | fh |
| 299 | 3813 | No | seek |
| 300 | 0 | No | tell |
| 303 | 7660 | n/a | _option |
| 314 | 0 | No | version |
| 315 | 2 | Yes | seqid |
| 316 | 4 | Yes | min |
| 317 | 4 | Yes | max |
| 318 | 3818 | Yes | step |
| 319 | 9 | Yes | span |
| 320 | 1 | Yes | mean |
| 321 | 1 | Yes | stdev |
| 322 | 3 | Yes | trim |
| 325 | 3818 | No | start |
| 336 | 0 | No | smoothing |
| 343 | 3 | No | write |
| 352 | 2 | n/a | _readoptions |
| 361 | 1 | n/a | _parse_header |
| 378 | 1 | n/a | _generate_header |
| 384 | 1 | n/a | _writeoptions |
| 393 | 1 | n/a | _do_trim |
| 417 | 1 | n/a | _trim_stdev |
| 430 | 3809 | Yes | set_value |
| 437 | 0 | Yes | set_range |
| 444 | 3809 | Yes | value |
| 493 | 3813 | n/a | _calculate_offset |
| 501 | 0 | Yes | set_values |
| 509 | 4 | Yes | values |
| 519 | 0 | Yes | export_to_wif64 |
| 526 | 0 | Yes | import_from_wif64 |
| 536 | 0 | Yes | export_to_wif |
| 552 | 1 | No | export_to_bedgraph |
| 571 | 1 | n/a | _bedgraph_lines |
| 603 | 57 | n/a | _append_or_print_bedgraph |
| 615 | 0 | Yes | import_from_wif |
| 636 | 4 | n/a | _retrieve_values |
| 721 | 4 | n/a | _retrieve_packed_range |
| 739 | 4 | No | sample |
| 766 | 0 | No | smoothsub |
| 778 | 0 | No | smooth |
| 801 | 4 | No | window |
| 808 | 0 | No | sample_mean |
| 819 | 0 | No | sample_max |
| 829 | 0 | No | sample_min |
| 839 | 0 | No | sample_center |
| 844 | 0 | n/a | _store_values |
| 865 | 3809 | No | scale |
| 887 | 4 | No | unscale |
| 901 | 3813 | n/a | _get_scale |
| 912 | 3809 | No | round |