Subroutine Coverage
| lib/Bio/Graphics/FeatureFile.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
28 |
94 |
29.7
|
| pod |
38 |
66 |
57.5
|
| line |
count |
pod |
subroutine |
|
252
|
2 |
n/a |
BEGIN |
|
253
|
2 |
n/a |
BEGIN |
|
254
|
2 |
n/a |
BEGIN |
|
255
|
2 |
n/a |
BEGIN |
|
256
|
2 |
n/a |
BEGIN |
|
257
|
2 |
n/a |
BEGIN |
|
258
|
2 |
n/a |
BEGIN |
|
259
|
2 |
n/a |
BEGIN |
|
260
|
2 |
n/a |
BEGIN |
|
261
|
2 |
n/a |
BEGIN |
|
262
|
2 |
n/a |
BEGIN |
|
272
|
2 |
n/a |
BEGIN |
|
273
|
2 |
n/a |
BEGIN |
|
285
|
0 |
Yes |
version |
|
357
|
1 |
Yes |
new |
|
361
|
1 |
n/a |
_new |
|
389
|
2 |
n/a |
BEGIN |
|
417
|
0 |
Yes |
new_from_cache |
|
453
|
0 |
No |
cachedir |
|
459
|
0 |
No |
cachefile |
|
476
|
0 |
Yes |
file_mtime |
|
506
|
0 |
No |
file_list |
|
578
|
0 |
Yes |
render |
|
682
|
1 |
n/a |
_stat |
|
697
|
0 |
n/a |
_visible |
|
715
|
0 |
Yes |
error |
|
734
|
0 |
Yes |
smart_features |
|
741
|
0 |
No |
parse_argv |
|
751
|
1 |
No |
parse_file |
|
766
|
1 |
No |
parse_fh |
|
778
|
0 |
No |
parse_text |
|
787
|
5 |
No |
parse_line |
|
832
|
5 |
n/a |
_state_transition |
|
857
|
4 |
No |
parse_config_line |
|
901
|
1 |
No |
parse_data_line |
|
908
|
1 |
n/a |
_make_loader |
|
946
|
1 |
No |
db |
|
963
|
0 |
Yes |
allow_whitespace |
|
985
|
0 |
Yes |
add_feature |
|
1014
|
0 |
Yes |
add_type |
|
1043
|
0 |
Yes |
set |
|
1056
|
1 |
No |
finished |
|
1061
|
1 |
n/a |
DESTROY |
|
1091
|
0 |
Yes |
setting |
|
1124
|
0 |
Yes |
fallback_setting |
|
1139
|
0 |
n/a |
_setting |
|
1163
|
0 |
Yes |
code_setting |
|
1197
|
0 |
n/a |
_callback_complain |
|
1216
|
0 |
Yes |
safe_setting |
|
1250
|
0 |
n/a |
__ANON__ |
|
1252
|
0 |
n/a |
__ANON__ |
|
1282
|
0 |
Yes |
safe |
|
1303
|
0 |
Yes |
safe_world |
|
1352
|
0 |
Yes |
set_callback_source |
|
1358
|
0 |
Yes |
get_callback_source |
|
1377
|
0 |
Yes |
style |
|
1404
|
0 |
Yes |
glyph |
|
1427
|
0 |
Yes |
configured_types |
|
1433
|
0 |
No |
labels |
|
1448
|
0 |
Yes |
types |
|
1455
|
0 |
n/a |
_patch_old_bioperl |
|
1461
|
0 |
n/a |
__ANON__ |
|
1514
|
0 |
Yes |
features |
|
1552
|
0 |
No |
make_strand |
|
1578
|
0 |
Yes |
get_seq_stream |
|
1608
|
0 |
Yes |
get_feature_by_name |
|
1618
|
0 |
No |
get_features_by_name |
|
1638
|
0 |
Yes |
search_notes |
|
1665
|
0 |
Yes |
refs |
|
1681
|
0 |
Yes |
min |
|
1697
|
0 |
Yes |
max |
|
1703
|
0 |
n/a |
_min_max |
|
1724
|
1 |
No |
init_parse |
|
1736
|
0 |
No |
finish_parse |
|
1750
|
0 |
No |
evaluate_coderefs |
|
1758
|
0 |
No |
evaluate_safecoderefs |
|
1767
|
0 |
No |
clean_code |
|
1777
|
0 |
No |
initialize_code |
|
1786
|
0 |
No |
base2package |
|
1793
|
0 |
No |
split_group |
|
1800
|
0 |
No |
new_panel |
|
1852
|
0 |
Yes |
mtime |
|
1857
|
0 |
Yes |
atime |
|
1858
|
0 |
Yes |
ctime |
|
1859
|
0 |
Yes |
size |
|
1874
|
0 |
Yes |
feature2label |
|
1899
|
0 |
Yes |
link_pattern |
|
1911
|
0 |
n/a |
__ANON__ |
|
1941
|
0 |
No |
make_link |
|
1956
|
0 |
No |
make_title |
|
1991
|
0 |
No |
type2label |
|
1999
|
0 |
No |
invert_types |
|
2026
|
0 |
Yes |
citation |
|
2044
|
0 |
Yes |
name |