Subroutine Coverage
| blib/lib/Bio/Gonzales/Seq.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
22 |
39 |
56.4
|
| pod |
13 |
27 |
48.1
|
| line |
count |
pod |
subroutine |
|
3
|
9 |
n/a |
BEGIN |
|
5
|
9 |
n/a |
BEGIN |
|
7
|
9 |
n/a |
BEGIN |
|
8
|
9 |
n/a |
BEGIN |
|
9
|
9 |
n/a |
BEGIN |
|
10
|
9 |
n/a |
BEGIN |
|
11
|
9 |
n/a |
BEGIN |
|
12
|
9 |
n/a |
BEGIN |
|
26
|
0 |
n/a |
_build_gaps |
|
30
|
1 |
No |
ungapped_seq |
|
33
|
5 |
n/a |
_build_length |
|
37
|
61 |
Yes |
BUILDARGS |
|
59
|
0 |
No |
as_hash |
|
64
|
1 |
No |
Format_seq_string |
|
76
|
0 |
Yes |
def |
|
90
|
63 |
n/a |
_filter_seq |
|
110
|
1 |
Yes |
gapless_seq |
|
115
|
0 |
No |
rm_gaps |
|
122
|
0 |
Yes |
clone |
|
135
|
0 |
Yes |
clone_empty |
|
146
|
1 |
Yes |
display_id |
|
149
|
0 |
Yes |
ungapped_length |
|
154
|
0 |
No |
sequence |
|
157
|
220 |
No |
stringify |
|
162
|
220 |
Yes |
all |
|
164
|
0 |
Yes |
all_formatted |
|
167
|
1 |
No |
stringify_pretty |
|
177
|
1 |
Yes |
all_pretty |
|
179
|
0 |
No |
pretty |
|
182
|
0 |
Yes |
as_primaryseq |
|
194
|
1 |
No |
guess_alphabet |
|
228
|
1 |
Yes |
revcom |
|
236
|
0 |
No |
revcom_seq |
|
241
|
0 |
Yes |
subseq |
|
270
|
0 |
No |
sha1_checksum |
|
274
|
0 |
No |
md5_checksum |
|
278
|
0 |
No |
sha512_checksum |
|
285
|
0 |
No |
subseq_as_string |
|
342
|
1 |
n/a |
_revcom_from_string |