| line |
true |
false |
branch |
|
144
|
0 |
20001 |
if $swit ne 'nuc' and $swit ne 'pep' |
|
151
|
100199 |
0 |
if ($swit eq 'nuc' and exists $NTIDES{$CH} or $swit eq 'pep' and exists $AACIDS{$CH}) { } |
|
240
|
0 |
0 |
if ($GCperc < $min) |
|
244
|
0 |
0 |
if ($GCperc > $max) |
|
279
|
1 |
2 |
if ($len < 14) { } |
|
|
2 |
0 |
elsif ($len >= 14 and $len <= 50) { } |
|
|
0 |
0 |
elsif ($len > 50) { } |
|
337
|
1189 |
1 |
if $swit |
|
372
|
6505 |
24 |
if ($swit == 1) { } |
|
|
24 |
0 |
elsif ($swit == 2) { } |
|
375
|
0 |
6505 |
unless $ntide |
|
381
|
0 |
24 |
unless $aa |
|
397
|
202 |
571 |
if ($comp ne $sequence) |
|
431
|
0 |
0 |
if (_is_ambiguous($pattern)) |
|
453
|
1 |
4 |
if $sequence =~ /$ambnt/ |
|
470
|
0 |
433 |
if not $botseq or length $botseq != length $topseq |
|
475
|
814 |
1690 |
if ($topbit ne $botbit) |
|
477
|
340 |
474 |
$topbit =~ /$REGHSH{'R'}/ ? : |
|
478
|
364 |
450 |
$botbit =~ /$REGHSH{'R'}/ ? : |
|
479
|
314 |
500 |
if $topbit == $botbit |
|
480
|
500 |
314 |
if $topbit != $botbit |
|
508
|
44 |
3 |
if ($possibilities == 1) { } |
|
510
|
10 |
34 |
if $offset == 0 |
|
511
|
34 |
10 |
if $offset > 0 |
|
515
|
0 |
3 |
if $offset == 0 |
|
516
|
3 |
0 |
if $offset > 0 |
|
518
|
37 |
10 |
unless ($offset == 0) |