| line |
true |
false |
branch |
|
119
|
0 |
20001 |
if $swit ne 'nuc' and $swit ne 'pep'
|
|
126
|
100199 |
0 |
if ($swit eq 'nuc' and exists $NTIDES{$CH} or $swit eq 'pep' and exists $AACIDS{$CH}) { }
|
|
202
|
1 |
2 |
if ($len < 14) { }
|
|
|
2 |
0 |
elsif ($len >= 14 and $len <= 50) { }
|
|
|
0 |
0 |
elsif ($len > 50) { }
|
|
260
|
1184 |
1 |
if $swit
|
|
284
|
6497 |
24 |
if ($swit == 1) { }
|
|
|
24 |
0 |
elsif ($swit == 2) { }
|
|
287
|
0 |
6497 |
unless $ntide
|
|
293
|
0 |
24 |
unless $aa
|
|
309
|
201 |
571 |
if ($comp ne $sequence)
|
|
341
|
1 |
4 |
if $sequence =~ /$ambnt/
|
|
358
|
0 |
362 |
if not $botseq or length $botseq != length $topseq
|
|
363
|
586 |
1208 |
if ($topbit ne $botbit)
|
|
365
|
244 |
342 |
$topbit =~ /$REGHSH{'R'}/ ? :
|
|
366
|
268 |
318 |
$botbit =~ /$REGHSH{'R'}/ ? :
|
|
367
|
230 |
356 |
if $topbit == $botbit
|
|
368
|
356 |
230 |
if $topbit != $botbit
|
|
396
|
44 |
3 |
if ($possibilities == 1) { }
|
|
398
|
10 |
34 |
if $offset == 0
|
|
399
|
34 |
10 |
if $offset > 0
|
|
403
|
0 |
3 |
if $offset == 0
|
|
404
|
3 |
0 |
if $offset > 0
|
|
406
|
37 |
10 |
unless ($offset == 0)
|