Condition Coverage

blib/lib/Bio/FdrFet.pm
Criterion Covered Total %
condition 19 33 57.5


and 3 conditions

line !l l&&!r l&&r condition
285 28 0 5352 exists $$self{'PATHWAYS'}{$arg{'dbacc'}} and exists $$self{'PATHWAYS'}{$arg{'dbacc'}}{'DESC'}
320 45396 0 0 exists $$self{'GENES'}{$arg{'gene'}}{'PVAL'} and $$self{'GENES'}{$arg{'gene'}}{'PVAL'} != $arg{'pval'}
507 0 0 8 $cutoff > 0 and $cutoff <= 100
0 0 8 $cutoff > 0 and $cutoff <= 100 and $cutoff == int $cutoff
551 3103 1482 563006 defined $$self{'GENES'}{$a}{'PVAL'} && defined $$self{'GENES'}{$b}{'PVAL'}
579 8925 1107249 109561 defined $_ and $_ <= $qlevel * $i++ / $$self{'GENE_COUNT'}
598 0 0 1 $$self{'GENE_COUNT'} >= scalar keys %{$$self{'GENES'};} and $$self{'GENE_COUNT'} >= $sum
612 85 0 11349 exists $$self{'GENES'}{$gene}{'PVAL'} && defined $$self{'GENES'}{$gene}{'PVAL'}
615 10630 85 719 $exists_pathway and $exists_pval

or 3 conditions

line l !l&&r !l&&!r condition
453 0 0 4 $fdr < 1 or $fdr > $$self{'FDR_CUTOFF'}
0 0 4 $fdr < 1 or $fdr > $$self{'FDR_CUTOFF'} or int $fdr != $fdr