| line |
true |
false |
branch |
|
81
|
0 |
0 |
if (not defined $self->{'_WebEnv'} or defined $self->{'_WebEnv'} and $self->{'_WebEnv'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_api_key'} or defined $self->{'_api_key'} and $self->{'_api_key'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_cmd'} or defined $self->{'_cmd'} and $self->{'_cmd'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_complexity'} or defined $self->{'_complexity'} and $self->{'_complexity'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_datetype'} or defined $self->{'_datetype'} and $self->{'_datetype'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
6 |
1 |
if (not defined $self->{'_db'} or defined $self->{'_db'} and $self->{'_db'} ne $val) |
|
|
7 |
8 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_dbfrom'} or defined $self->{'_dbfrom'} and $self->{'_dbfrom'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
1 |
1 |
if (not defined $self->{'_email'} or defined $self->{'_email'} and $self->{'_email'} ne $val) |
|
|
2 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_field'} or defined $self->{'_field'} and $self->{'_field'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_holding'} or defined $self->{'_holding'} and $self->{'_holding'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
3 |
1 |
if (not defined $self->{'_id'} or defined $self->{'_id'} and $self->{'_id'} ne $val) |
|
|
4 |
5 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_idtype'} or defined $self->{'_idtype'} and $self->{'_idtype'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_linkname'} or defined $self->{'_linkname'} and $self->{'_linkname'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_maxdate'} or defined $self->{'_maxdate'} and $self->{'_maxdate'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_mindate'} or defined $self->{'_mindate'} and $self->{'_mindate'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_query_key'} or defined $self->{'_query_key'} and $self->{'_query_key'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_reldate'} or defined $self->{'_reldate'} and $self->{'_reldate'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_report'} or defined $self->{'_report'} and $self->{'_report'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_retmax'} or defined $self->{'_retmax'} and $self->{'_retmax'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
7 |
2 |
if (not defined $self->{'_retmode'} or defined $self->{'_retmode'} and $self->{'_retmode'} ne $val) |
|
|
9 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_retstart'} or defined $self->{'_retstart'} and $self->{'_retstart'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_rettype'} or defined $self->{'_rettype'} and $self->{'_rettype'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_seq_start'} or defined $self->{'_seq_start'} and $self->{'_seq_start'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_seq_stop'} or defined $self->{'_seq_stop'} and $self->{'_seq_stop'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_sort'} or defined $self->{'_sort'} and $self->{'_sort'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_strand'} or defined $self->{'_strand'} and $self->{'_strand'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
2 |
0 |
if (not defined $self->{'_term'} or defined $self->{'_term'} and $self->{'_term'} ne $val) |
|
|
2 |
2 |
if (defined $val) |
|
|
6 |
0 |
if (not defined $self->{'_tool'} or defined $self->{'_tool'} and $self->{'_tool'} ne $val) |
|
|
6 |
6 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_usehistory'} or defined $self->{'_usehistory'} and $self->{'_usehistory'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
|
0 |
0 |
if (not defined $self->{'_version'} or defined $self->{'_version'} and $self->{'_version'} ne $val) |
|
|
0 |
0 |
if (defined $val) |
|
105
|
0 |
6 |
unless $self->eutil |
|
106
|
6 |
0 |
unless $self->tool |
|
108
|
5 |
1 |
unless $retmode |
|
120
|
0 |
1 |
unless $newmode |
|
121
|
0 |
1 |
if $file |
|
130
|
0 |
0 |
if defined $$self{"_$_"} |
|
132
|
0 |
0 |
unless $self->eutil |
|
133
|
0 |
0 |
unless $retmode |
|
134
|
0 |
0 |
if $file |
|
142
|
0 |
0 |
if ($params) |
|
143
|
0 |
0 |
unless ref $params eq 'ARRAY' |
|
146
|
0 |
0 |
unless $mode eq 'add' or $mode eq 'delete' |
|
147
|
0 |
0 |
if (not scalar @$params) { } |
|
151
|
0 |
0 |
unless (exists $allowed{$p}) |
|
155
|
0 |
0 |
if ($mode eq 'add') { } |
|
159
|
0 |
0 |
if exists $self->{'_carryover'}{$p} |
|
177
|
0 |
1 |
if defined $mode |
|
179
|
0 |
1 |
if ($mode) |
|
182
|
0 |
0 |
unless exists $valid{$mode} |
|
185
|
0 |
1 |
if $self->{'_request_mode'} |
|
192
|
1 |
0 |
if (scalar @{$MODE{$eutil}{'mode'};} > 1) |
|
194
|
0 |
1 |
if (ref $id eq 'ARRAY' and scalar @$id > 200 or length $term > 300) |
|
212
|
1 |
3 |
if ($type eq 'all') { } |
|
215
|
0 |
3 |
unless exists $MODE{$type} |
|
224
|
0 |
2 |
if $list and ref $list ne 'ARRAY' |
|
226
|
0 |
2 |
$list ? : |
|
229
|
1 |
46 |
if ($param eq 'id' and $self->id and $join) { } |
|
|
1 |
45 |
elsif ($param eq 'db' and $self->db and $join) { } |
|
231
|
0 |
1 |
if ($self->correspondence and $self->eutil eq 'elink') { } |
|
233
|
0 |
0 |
if (ref $id_group eq 'ARRAY') { } |
|
|
0 |
0 |
elsif (not ref $id_group) { } |
|
246
|
1 |
0 |
ref $id eq 'ARRAY' ? : |
|
253
|
0 |
1 |
ref $db eq 'ARRAY' ? : |
|
257
|
8 |
37 |
if defined $$self{"_$param"} |
|
267
|
1 |
0 |
if ($self->parameters_changed or not defined $self->{'_string_cache'}) |
|
278
|
1 |
1 |
if ($self->parameters_changed or not defined $self->{'_request_cache'}) |
|
280
|
0 |
1 |
unless $eutil |
|
286
|
1 |
0 |
if ($mode eq 'GET') { } |
|
|
0 |
0 |
elsif ($mode eq 'POST') { } |
|
308
|
7 |
18 |
if ($eutil) |
|
309
|
0 |
7 |
unless exists $MODE{$eutil} |
|
310
|
6 |
1 |
if (not defined $self->{'_eutil'} or $self->{'_eutil'} and $self->{'_eutil'} ne $eutil) |
|
321
|
0 |
0 |
if ($history) |
|
322
|
0 |
0 |
unless $history->isa('Bio::Tools::EUtilities::HistoryI') |
|
336
|
0 |
1 |
if (defined $corr) |
|
346
|
0 |
0 |
if ($file) |
|
387
|
0 |
5 |
if ($self->eutil eq 'efetch') { } |
|
389
|
0 |
0 |
exists $NCBI_DATABASE{$db} ? : |
|
399
|
0 |
0 |
unless (defined $self->{'_io'}) |