| blib/lib/Bio/DB/Das/Chado.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 14 | 60 | 23.3 |
| pod | 32 | 38 | 84.2 |
| line | count | pod | subroutine |
|---|---|---|---|
| 85 | 1 | n/a | BEGIN |
| 87 | 1 | n/a | BEGIN |
| 88 | 1 | n/a | BEGIN |
| 89 | 1 | n/a | BEGIN |
| 90 | 1 | n/a | BEGIN |
| 91 | 1 | n/a | BEGIN |
| 92 | 1 | n/a | BEGIN |
| 93 | 1 | n/a | BEGIN |
| 94 | 1 | n/a | BEGIN |
| 95 | 1 | n/a | BEGIN |
| 97 | 1 | n/a | BEGIN |
| 99 | 1 | n/a | BEGIN |
| 100 | 1 | n/a | BEGIN |
| 101 | 1 | n/a | BEGIN |
| 229 | 0 | Yes | new |
| 388 | 0 | Yes | feature_summary |
| 462 | 0 | Yes | coverage_array |
| 566 | 0 | n/a | _types_sql |
| 617 | 0 | Yes | tripal |
| 651 | 0 | Yes | fulltext |
| 682 | 0 | Yes | refclass |
| 701 | 0 | Yes | use_all_feature_names |
| 745 | 0 | Yes | organism_id |
| 836 | 0 | Yes | inferCDS |
| 859 | 0 | Yes | allow_obsolete |
| 877 | 0 | Yes | sofa_id |
| 924 | 0 | Yes | recursivMapping |
| 943 | 0 | Yes | srcfeatureslice |
| 959 | 0 | Yes | do2Level |
| 977 | 0 | Yes | dbh |
| 1015 | 0 | Yes | term2name |
| 1045 | 0 | Yes | name2term |
| 1119 | 0 | Yes | segment |
| 1176 | 0 | Yes | features |
| 1198 | 0 | Yes | get_seq_stream |
| 1249 | 0 | Yes | types |
| 1284 | 0 | Yes | get_feature_by_alias |
| 1329 | 0 | Yes | get_feature_by_name |
| 1360 | 0 | n/a | _by_alias_by_name |
| 1818 | 0 | n/a | _search_name_prep_spaces |
| 1831 | 0 | No | get_feature_by_feature_id |
| 1839 | 0 | Yes | get_feature_by_id |
| 1849 | 0 | n/a | _complex_search |
| 1880 | 0 | n/a | _search_name_prep |
| 1915 | 0 | Yes | srcfeature2name |
| 1939 | 0 | Yes | gff_source_db_id |
| 1961 | 0 | No | source2dbxref |
| 1993 | 0 | Yes | dbxref2source |
| 2048 | 0 | Yes | source_dbxref_list |
| 2162 | 0 | Yes | attributes |
| 2257 | 0 | No | default_class |
| 2278 | 0 | No | check_chado_reference_class |
| 2311 | 0 | Yes | chado_reference_class |
| 2351 | 0 | Yes | refclass_feature_id |
| 2360 | 0 | n/a | _segclass |
| 2362 | 0 | No | absolute |
| 2368 | 0 | Yes | clone |
| 2405 | 0 | No | aggregators |
| 2415 | 0 | n/a | new |
| 2421 | 0 | n/a | next_seq |