| line |
true |
false |
branch |
|
35
|
0 |
35 |
if $in |
|
36
|
0 |
35 |
if $out |
|
37
|
0 |
35 |
if $mappers |
|
38
|
1 |
34 |
if $return_match |
|
46
|
0 |
199 |
unless defined $value and $value->isa('Bio::Coordinate::MapperI') |
|
50
|
0 |
199 |
unless $value->test |
|
63
|
0 |
0 |
if (@args) |
|
64
|
0 |
0 |
if (@args == 1 and ref $args[0] eq 'ARRAY') |
|
67
|
0 |
0 |
unless defined $args[0] and $args[0]->isa('Bio::Coordinate::MapperI') |
|
84
|
0 |
1 |
unless $self->{'_mappers'} |
|
91
|
8 |
11 |
unless $self->_is_sorted |
|
105
|
0 |
0 |
unless ($mapper->test) |
|
119
|
0 |
23 |
unless defined $value |
|
121
|
0 |
23 |
unless $value->isa('Bio::LocationI') |
|
123
|
0 |
23 |
unless $self->each_mapper |
|
126
|
8 |
15 |
unless $self->_is_sorted |
|
128
|
3 |
20 |
if ($value->isa('Bio::Location::SplitLocationI')) { } |
|
156
|
0 |
25 |
if defined $value->seq_id and not $self->{'_in_ids'}{$value->seq_id} |
|
161
|
100 |
67 |
if defined $value->seq_id and $value->seq_id ne $pair->in->seq_id |
|
164
|
18 |
49 |
if $pair->in->end < $value->start |
|
166
|
13 |
36 |
if $pair->in->start > $value->end |
|
173
|
25 |
0 |
if $result->match |
|
174
|
0 |
25 |
unless ($result->each_Location) |
|
181
|
0 |
0 |
if defined $value->seq_id |
|
183
|
0 |
0 |
if defined $value->seq_id |
|
213
|
17 |
241 |
if defined $value and $value |