Subroutine Coverage
| blib/lib/Bio/CUA/CodonTable.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
15 |
23 |
65.2
|
| pod |
14 |
14 |
100.0
|
| line |
count |
pod |
subroutine |
|
36
|
5 |
n/a |
BEGIN |
|
37
|
5 |
n/a |
BEGIN |
|
38
|
5 |
n/a |
BEGIN |
|
39
|
5 |
n/a |
BEGIN |
|
105
|
4 |
Yes |
new |
|
130
|
0 |
n/a |
_build_table_by_file |
|
161
|
4 |
n/a |
_build_table_by_id |
|
258
|
0 |
Yes |
name |
|
273
|
0 |
Yes |
id |
|
288
|
0 |
Yes |
total_num_of_codons |
|
293
|
4 |
n/a |
_is_valid_gc_id |
|
302
|
768 |
n/a |
_is_stop_aa |
|
321
|
0 |
Yes |
is_valid_codon |
|
343
|
28 |
Yes |
all_sense_codons |
|
365
|
8 |
Yes |
all_amino_acids |
|
391
|
0 |
Yes |
all_start_codons |
|
410
|
0 |
Yes |
all_stop_codons |
|
426
|
160 |
Yes |
codons_of_AA |
|
451
|
1 |
Yes |
codon_to_AA_map |
|
469
|
0 |
Yes |
translate |
|
503
|
128 |
Yes |
is_stop_codon |
|
513
|
128 |
n/a |
_process_codon |
|
546
|
53 |
Yes |
codon_degeneracy |