Subroutine Coverage
| blib/lib/Bio/CUA/Summarizer.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
19 |
23 |
82.6
|
| pod |
9 |
11 |
81.8
|
| line |
count |
pod |
subroutine |
|
3
|
4 |
n/a |
BEGIN |
|
4
|
4 |
n/a |
BEGIN |
|
5
|
4 |
n/a |
BEGIN |
|
6
|
4 |
n/a |
BEGIN |
|
7
|
4 |
n/a |
BEGIN |
|
20
|
4 |
n/a |
BEGIN |
|
104
|
3 |
Yes |
new |
|
148
|
249 |
Yes |
codon_table |
|
163
|
1 |
Yes |
bases |
|
183
|
57 |
No |
get_codon_list |
|
227
|
6 |
Yes |
tabulate_codons |
|
269
|
0 |
Yes |
tabulate_AAs |
|
299
|
6 |
n/a |
_get_seq_io |
|
318
|
2 |
No |
all_sense_codons |
|
333
|
8 |
Yes |
all_AAs_in_table |
|
350
|
160 |
Yes |
codons_of_AA |
|
383
|
52 |
Yes |
aa_degeneracy_classes |
|
401
|
26 |
Yes |
codons_by_degeneracy |
|
420
|
0 |
n/a |
_is_sense_codon |
|
432
|
0 |
n/a |
_is_stop_codon |
|
440
|
0 |
n/a |
_codon_to_aa |
|
450
|
130 |
n/a |
_catalog_codons |
|
474
|
130 |
n/a |
_get_seq_str |