| line |
true |
false |
branch |
|
85
|
28 |
2132 |
unless ($pieces->[0]{'is_orig'})
|
|
86
|
0 |
28 |
if @{$pieces->[0]{'annot2'};}
|
|
87
|
28 |
0 |
if $pieces->[0]{'annot1'}
|
|
90
|
1928 |
232 |
$len < $usable_len ? :
|
|
99
|
31 |
217 |
if @{$pieces->[$i]{'annot2'};}
|
|
100
|
192 |
56 |
if $pieces->[$i]{'annot1'}
|
|
104
|
176 |
72 |
$miss_len < $pieces->[$i]{'len'} ? :
|
|
124
|
2132 |
28 |
$pieces->[0]{'is_orig'} ? :
|
|
|
1979 |
181 |
$pieces->[-1]{'is_orig'} ? :
|
|
|
1971 |
189 |
$read_end_piece->{'is_orig'} ? :
|
|
|
2132 |
28 |
$read_start_piece->{'is_orig'} ? :
|
|
141
|
2850 |
220 |
if ($self->sequencing_error)
|