| lib/App/Sandy/DB/Handle/Variation.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| condition | 0 | 27 | 0.0 |
| line | !l | l&&!r | l&&r | condition |
|---|---|---|---|---|
| 241 | 0 | 0 | 0 | defined $g2 and $g2 eq '.' |
| 349 | 0 | 0 | 0 | $next_snv->{'ref'} eq '-' and $prev_snv->{'ref'} eq '-' |
| 0 | 0 | 0 | $next_snv->{'ref'} eq '-' and $prev_snv->{'ref'} eq '-' and $next_snv->{'pos'} != $prev_snv->{'pos'} | |
| 0 | 0 | 0 | $next_snv->{'ref'} eq '-' and $prev_snv->{'ref'} ne '-' | |
| 0 | 0 | 0 | $next_snv->{'ref'} eq '-' and $prev_snv->{'ref'} ne '-' and $next_snv->{'pos'} < $prev_snv->{'pos'} |
| line | l | !l&&r | !l&&!r | condition |
|---|---|---|---|---|
| 225 | 0 | 0 | 0 | $fields[3] =~ /<\w+>/u or $fields[4] =~ /<\w+>/u |
| 241 | 0 | 0 | 0 | $g1 eq '.' or defined $g2 and $g2 eq '.' |
| 246 | 0 | 0 | 0 | not defined $g2 or $g1 == $g2 |
| 344 | 0 | 0 | 0 | $i == $j or $blacklist{&refaddr($next_snv)} |