| line |
true |
false |
branch |
|
29
|
0 |
13 |
if (lc $fn eq 'stdin') { } |
|
55
|
0 |
122 |
if $remove_chr |
|
78
|
0 |
241 |
if $remove_chr |
|
108
|
36 |
3 |
if (defined $chr_name and defined $chr_start) { } |
|
109
|
1 |
35 |
unless (defined $chr_end) |
|
119
|
16 |
20 |
if (defined $info{'strand'}) |
|
120
|
0 |
16 |
if ($info{'strand'} eq '1') { } |
|
|
0 |
16 |
elsif ($info{'strand'} eq '-1') { } |
|
141
|
1 |
38 |
if ($header =~ /\|(.+)/) |
|
145
|
1 |
0 |
if (defined $key and defined $value) |
|
157
|
42 |
0 |
if (ref $info eq 'HASH') |
|
158
|
42 |
0 |
if (exists $info->{'chr'} and exists $info->{'start'}) |
|
159
|
42 |
0 |
if (defined $info->{'chr'} and defined $info->{'start'}) |
|
173
|
7 |
12 |
if (defined $info->{'name'}) { } |
|
|
12 |
0 |
elsif (defined $info->{'chr'}) { } |
|
174
|
7 |
0 |
if (defined $info->{'chr'}) { } |
|
186
|
10 |
9 |
if (defined $info->{'strand'}) |
|
189
|
19 |
0 |
if (defined $info->{'start'}) |
|
191
|
17 |
2 |
if ($info->{'end'} != $info->{'start'}) |
|
197
|
19 |
0 |
unless ($only_essential) |
|
201
|
2 |
90 |
unless ($essential{$key}) |
|
205
|
2 |
17 |
if (@parts) |