| line |
true |
false |
branch |
|
31
|
1533 |
10276 |
if @_ > 0 |
|
43
|
0 |
0 |
$@ ? : |
|
91
|
2 |
17 |
if ($self->is_empty) |
|
100
|
6 |
14 |
$lower == $upper ? : |
|
120
|
95 |
100 |
unless $self->_contains($i) |
|
130
|
1 |
6 |
if $self->_contains($i) |
|
145
|
0 |
30444 |
if (scalar(@ranges) % 2 == 1) |
|
162
|
6447 |
1652 |
if (ref $first eq 'AlignDB::IntSpanXS') { } |
|
|
806 |
846 |
elsif (&isint($first)) { } |
|
166
|
38 |
768 |
if (scalar @_ > 0) { } |
|
200
|
861 |
0 |
if (ref $first eq 'AlignDB::IntSpanXS') { } |
|
|
0 |
0 |
elsif (&isint($first)) { } |
|
204
|
0 |
0 |
if (scalar @_ > 0) { } |
|
292
|
40 |
88 |
if ($self->edge_size != $supplied->edge_size) |
|
300
|
18 |
250 |
if ($edges_a[$i] != $edges_b[$i]) |
|
329
|
9 |
27 |
$result ? : |
|
338
|
9 |
27 |
$result ? : |
|
344
|
8 |
13 |
if ($index == 0 or abs $index > $self->cardinality) |
|
347
|
7 |
6 |
$index < 0 ? : |
|
365
|
3 |
6 |
if ($index > $element_before + $span_size) { } |
|
390
|
5 |
7 |
if ($index > $element_after + $span_size) { } |
|
415
|
8 |
8 |
if ($member >= $lower and $member <= $upper) { } |
|
432
|
2 |
9 |
if ($from < 1) |
|
453
|
45 |
30 |
if ($offset <= $span_size) { } |
|
463
|
11 |
45 |
unless @edges |
|
482
|
8 |
37 |
unless (defined $length) |
|
486
|
2 |
35 |
if ($length <= 0) |
|
496
|
28 |
26 |
if ($length <= $span_size) { } |
|
505
|
28 |
7 |
if (@$edges_ref) |
|
516
|
0 |
63 |
if ($self->is_empty) { } |
|
527
|
0 |
63 |
if ($self->is_empty) { } |
|
541
|
60 |
90 |
if (&$code_ref()) |
|
558
|
210 |
0 |
if (defined $element) |
|
595
|
0 |
0 |
$_ > $end ? : |
|
|
0 |
0 |
$_ < $start ? : |
|
608
|
5 |
1 |
if ($self->is_not_empty) |
|
619
|
1 |
13 |
if ($self->is_empty or $self->is_universal) { } |
|
628
|
13 |
0 |
if ($c_set->is_neg_inf) |
|
633
|
13 |
0 |
if ($c_set->is_pos_inf) |
|
652
|
34 |
4 |
if ($lower != $self->NEG_INF) |
|
655
|
34 |
4 |
if ($upper != $self->POS_INF) |
|
658
|
32 |
6 |
if $lower <= $upper |
|
692
|
8 |
0 |
if ($maxlength > 0) |
|
694
|
9 |
2 |
if ($hole->size <= $maxlength) |
|
712
|
0 |
28 |
unless $self->size and $supplied->size |
|
715
|
4 |
24 |
if $overlap |
|
722
|
9 |
20 |
$d1 < $d2 ? : |
|
723
|
27 |
2 |
if (not defined $min_d or $d < $min_d) |
|
737
|
4 |
7 |
if (ref $supplied eq 'AlignDB::IntSpanXS') { } |
|
|
7 |
0 |
elsif (&isint($supplied)) { } |
|
758
|
5 |
2 |
if ($pos & 1) |
|
772
|
4 |
0 |
if ($self->overlap($supplied)) |
|
774
|
5 |
3 |
if $subset->overlap($supplied) |
|
785
|
3 |
7 |
if (ref $supplied eq 'AlignDB::IntSpanXS') { } |
|
|
7 |
0 |
elsif (&isint($supplied)) { } |
|
798
|
2 |
17 |
if $s->overlap($ss) |
|
800
|
14 |
3 |
if (not defined $min_d or $d <= $min_d) |
|
801
|
2 |
12 |
if (defined $min_d and $d == $min_d) { } |
|
819
|
5 |
8 |
if $index == 0 or abs $index > $self->span_size |
|
823
|
1 |
7 |
$index < 0 ? : |
|
853
|
0 |
0 |
if $runlist eq $self->EMPTY_STRING |
|
858
|
0 |
0 |
if ($run =~ /^ (-?\d+) $/x) { } |
|
|
0 |
0 |
elsif ($run =~ /^ (-?\d+) - (-?\d+) $/x) { } |
|
862
|
0 |
0 |
if $1 > $2 |
|
878
|
722 |
4 |
if (defined $supplied and ref $supplied eq 'AlignDB::IntSpanXS') { } |