Subroutine Coverage
| blib/lib/Ace/Sequence.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
10 |
58 |
17.2
|
| pod |
19 |
34 |
55.8
|
| line |
count |
pod |
subroutine |
|
2
|
1 |
n/a |
BEGIN |
|
4
|
1 |
n/a |
BEGIN |
|
5
|
1 |
n/a |
BEGIN |
|
6
|
1 |
n/a |
BEGIN |
|
7
|
1 |
n/a |
BEGIN |
|
8
|
1 |
n/a |
BEGIN |
|
9
|
1 |
n/a |
BEGIN |
|
10
|
1 |
n/a |
BEGIN |
|
15
|
1 |
n/a |
BEGIN |
|
20
|
1 |
n/a |
BEGIN |
|
54
|
0 |
No |
new |
|
128
|
0 |
No |
source |
|
132
|
0 |
No |
parent |
|
137
|
0 |
Yes |
length |
|
142
|
0 |
Yes |
reversed |
|
145
|
0 |
Yes |
automerge |
|
153
|
0 |
Yes |
refseq |
|
200
|
0 |
Yes |
strand |
|
204
|
0 |
No |
r_strand |
|
213
|
0 |
Yes |
offset |
|
214
|
0 |
No |
p_offset |
|
216
|
0 |
No |
smapped |
|
217
|
0 |
No |
type |
|
218
|
0 |
No |
subtype |
|
221
|
0 |
No |
debug |
|
229
|
0 |
Yes |
db |
|
233
|
0 |
Yes |
start |
|
250
|
0 |
Yes |
end |
|
265
|
0 |
Yes |
absolute |
|
273
|
0 |
Yes |
asString |
|
286
|
0 |
No |
cmp |
|
298
|
0 |
Yes |
dna |
|
312
|
0 |
Yes |
gff |
|
329
|
0 |
Yes |
GFF |
|
346
|
0 |
Yes |
features |
|
377
|
0 |
Yes |
transcripts |
|
388
|
0 |
n/a |
_make_transcripts |
|
416
|
0 |
Yes |
clones |
|
424
|
0 |
n/a |
_make_clones |
|
472
|
0 |
No |
alignments |
|
480
|
0 |
No |
segments |
|
485
|
0 |
n/a |
_make_alignments |
|
504
|
0 |
Yes |
feature_list |
|
512
|
0 |
No |
transformGFF |
|
542
|
0 |
Yes |
name |
|
547
|
0 |
No |
info |
|
555
|
0 |
No |
find_parent |
|
571
|
0 |
n/a |
_get_parent |
|
582
|
0 |
n/a |
_get_children |
|
590
|
0 |
n/a |
_traverse |
|
609
|
0 |
n/a |
_get_toplevel |
|
624
|
0 |
n/a |
_make_filter |
|
668
|
0 |
n/a |
__ANON__ |
|
675
|
0 |
n/a |
_make_features |
|
693
|
0 |
n/a |
_gff |
|
702
|
0 |
n/a |
_query |
|
726
|
0 |
n/a |
_complement |
|
732
|
0 |
n/a |
_feature_filter |