|  line  | 
 stmt  | 
 bran  | 
 cond  | 
 sub  | 
 pod  | 
 time  | 
 code  | 
| 
1
 | 
 
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 | 
 
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 package SVG::VCD;  | 
| 
2
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
3
 | 
1
 | 
 
 | 
 
 | 
  
1
  
 | 
 
 | 
20059
 | 
 use strict;  | 
| 
 
 | 
1
 | 
 
 | 
 
 | 
 
 | 
 
 | 
2
 | 
    | 
| 
 
 | 
1
 | 
 
 | 
 
 | 
 
 | 
 
 | 
43
 | 
    | 
| 
4
 | 
1
 | 
 
 | 
 
 | 
  
1
  
 | 
 
 | 
4
 | 
 use warnings;  | 
| 
 
 | 
1
 | 
 
 | 
 
 | 
 
 | 
 
 | 
2
 | 
    | 
| 
 
 | 
1
 | 
 
 | 
 
 | 
 
 | 
 
 | 
32
 | 
    | 
| 
5
 | 
1
 | 
 
 | 
 
 | 
  
1
  
 | 
 
 | 
869
 | 
 use IO::File;  | 
| 
 
 | 
1
 | 
 
 | 
 
 | 
 
 | 
 
 | 
9791
 | 
    | 
| 
 
 | 
1
 | 
 
 | 
 
 | 
 
 | 
 
 | 
110
 | 
    | 
| 
6
 | 
1
 | 
 
 | 
 
 | 
  
1
  
 | 
 
 | 
457
 | 
 use SVG::VCD::Taxon;  | 
| 
 
 | 
1
 | 
 
 | 
 
 | 
 
 | 
 
 | 
2
 | 
    | 
| 
 
 | 
1
 | 
 
 | 
 
 | 
 
 | 
 
 | 
488
 | 
    | 
| 
7
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
8
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
9
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 our $VERSION = 0.4;  | 
| 
10
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
11
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
12
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 sub new {  | 
| 
13
 | 
0
 | 
 
 | 
 
 | 
  
0
  
 | 
  
0
  
 | 
 
 | 
     my $class = shift();  | 
| 
14
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     my($filename) = @_;  | 
| 
15
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
16
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     my $this = bless {  | 
| 
17
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	filename => $filename,  | 
| 
18
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	config => {},  | 
| 
19
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	taxa => [],  | 
| 
20
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     }, $class;  | 
| 
21
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 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
22
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     $this->parse();  | 
| 
23
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     return $this;  | 
| 
24
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 }  | 
| 
25
 | 
 
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 | 
 
 | 
 
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 | 
 
 | 
    | 
| 
26
 | 
 
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 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
27
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 sub parse {  | 
| 
28
 | 
0
 | 
 
 | 
 
 | 
  
0
  
 | 
  
0
  
 | 
 
 | 
     my $this = shift();  | 
| 
29
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     my $filename = $this->{filename};  | 
| 
30
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
31
 | 
0
 | 
  
  0
  
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     my $f = new IO::File("<$filename")  | 
| 
32
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	or die "$0: can't open VCD-file '$filename': $!";  | 
| 
33
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
34
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     my %fields = ();  | 
| 
35
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
36
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     while (my $line = <$f>) {  | 
| 
37
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	chomp $line;  | 
| 
38
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	$line =~ s/^\s+//;  | 
| 
39
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	$line =~ s/#.*//;  | 
| 
40
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	$line =~ s/\s+$//;  | 
| 
41
 | 
0
 | 
  
  0
  
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	next if $line eq "";  | 
| 
42
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	my($star, $key, $value) = ($line =~ /^(\*?)([a-z0-9_-]+):\s*(.*)/i);  | 
| 
43
 | 
0
 | 
  
  0
  
 | 
  
  0
  
 | 
 
 | 
 
 | 
 
 | 
 	die "$0: $filename: bad line: '$line'" if !defined $key || $key eq "";  | 
| 
44
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	$key = lc($key);  | 
| 
45
 | 
0
 | 
  
  0
  
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	if ($star) {  | 
| 
46
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	    $this->{config}->{$key} = $value;  | 
| 
47
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	    next;  | 
| 
48
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	}  | 
| 
49
 | 
0
 | 
  
  0
  
 | 
  
  0
  
 | 
 
 | 
 
 | 
 
 | 
 	if ($key eq "taxon" && keys %fields > 1) {  | 
| 
50
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	    push @{ $this->{taxa} }, new SVG::VCD::Taxon(%fields);  | 
| 
 
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
51
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	    %fields = ();  | 
| 
52
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	}  | 
| 
53
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 	$fields{$key} = $value;  | 
| 
54
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     }  | 
| 
55
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
56
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     push @{ $this->{taxa} }, new SVG::VCD::Taxon(%fields);  | 
| 
 
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
57
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     $f->close();  | 
| 
58
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 }  | 
| 
59
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
60
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
61
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 sub config {  | 
| 
62
 | 
0
 | 
 
 | 
 
 | 
  
0
  
 | 
  
0
  
 | 
 
 | 
     my $this = shift();  | 
| 
63
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     my($key) = @_;  | 
| 
64
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
65
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     return $this->{config}->{$key};  | 
| 
66
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 }  | 
| 
67
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
68
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
69
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 sub ntaxa {  | 
| 
70
 | 
0
 | 
 
 | 
 
 | 
  
0
  
 | 
  
0
  
 | 
 
 | 
     my $this = shift();  | 
| 
71
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
72
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     return scalar @{ $this->{taxa} };  | 
| 
 
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
73
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 }  | 
| 
74
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
75
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
76
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 sub taxon {  | 
| 
77
 | 
0
 | 
 
 | 
 
 | 
  
0
  
 | 
  
0
  
 | 
 
 | 
     my $this = shift();  | 
| 
78
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     my($i) = @_;  | 
| 
79
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
80
 | 
0
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
     return $this->{taxa}->[$i];  | 
| 
81
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 }  | 
| 
82
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
83
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
    | 
| 
84
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 
 | 
 1;  |