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package Lingua::Ogmios::DocumentRecord; |
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3
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16
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74
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use strict; |
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16
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26
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16
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340
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4
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16
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69
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use warnings; |
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16
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25
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16
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358
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5
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6
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# use XML::Simple; |
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74
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use Lingua::Ogmios::Annotations; |
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36
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16
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333
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8
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16
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8147
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use Lingua::Ogmios::Annotations::LogProcessing; |
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38
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16
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42642
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9
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10
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my $debug_devel_level = 0; |
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12
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sub new { |
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0
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0
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0
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my ($class, $document_record, $platformConfig) = @_; |
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14
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15
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0
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my $doc = { |
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'annotations' => Lingua::Ogmios::Annotations->new($platformConfig), |
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'id' => undef, |
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'attributes' => [], |
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}; |
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21
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0
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bless $doc, $class; |
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22
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23
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# Parsing the file and loading into the structures |
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0
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$doc->setId($document_record); |
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25
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0
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$doc->_parse($document_record, $platformConfig); |
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26
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# Making the indexes |
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27
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28
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0
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return($doc); |
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29
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} |
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30
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31
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sub setId { |
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32
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0
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0
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0
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my ($self, $document_record) = @_; |
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33
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34
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0
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my $id; |
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35
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36
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0
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0
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if (UNIVERSAL::isa($document_record, 'XML::LibXML::Element')) { |
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37
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0
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$id = $document_record->getAttribute("id"); |
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38
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} else { |
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39
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0
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$id = $document_record; |
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40
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} |
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41
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42
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0
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0
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if (defined($id)) { |
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43
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0
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$self->getAnnotations->{'id'} = $id; |
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44
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} |
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45
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else { |
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46
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0
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warn "No id for record for doc " . ($self->getCount + 1) . "\n"; |
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47
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} |
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48
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} |
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49
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50
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sub getId { |
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51
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0
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0
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0
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my ($self) = @_; |
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52
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53
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0
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return($self->getAnnotations->{'id'}); |
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54
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} |
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55
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56
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sub setAttributes { |
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57
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0
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0
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0
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my ($self, $attributes) = @_; |
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58
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0
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my $attr; |
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59
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60
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0
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foreach $attr (@$attributes) { |
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61
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0
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push @{$self->{'attributes'}}, {'nodeName' => $attr->nodeName, |
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0
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62
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'value' => $attr->value, |
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63
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}; |
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64
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} |
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65
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} |
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66
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67
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sub getAttributes { |
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68
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0
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0
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0
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my ($self) = @_; |
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69
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70
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0
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return($self->{'attributes'}); |
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71
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} |
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72
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73
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sub _parse { |
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74
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0
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0
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my ($self, $document_record, $platformConfig) = @_; |
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75
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76
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0
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my $lingAnalysisLoad = $platformConfig->linguisticAnnotationLoading; |
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77
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78
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0
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warn "Processing document " . $self->getId . "\n"; |
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79
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80
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0
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my @attr = $document_record->attributes; |
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81
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0
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$self->setAttributes(\@attr); |
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82
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83
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0
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my $acquisition_section_node = $document_record->getChildrenByTagName('acquisition')->get_node(1); |
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84
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# my $acquisition_section_node; |
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85
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0
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0
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if (defined $acquisition_section_node) { |
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86
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# $acquisition_section_node = $acquisition_section_node_orig->cloneNode(1); |
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87
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0
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$self->getAnnotations->setAcquisitionSection($acquisition_section_node); |
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88
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0
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$self->getAnnotations->setLanguageFromXMLAndProperties($acquisition_section_node); |
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89
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0
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0
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if (!defined($self->getAnnotations->getLanguage)) { |
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90
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0
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$self->getAnnotations->setLanguage(uc($platformConfig->getOgmiosDefaultLanguage)); |
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91
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0
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print STDERR $self->getAnnotations->getLanguage . "\n"; |
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92
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} |
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93
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0
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$self->getAnnotations->setURLs($acquisition_section_node); |
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94
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0
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$self->getAnnotations->loadCanonicalDocument($acquisition_section_node); |
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95
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} else { |
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96
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0
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die "no acquisition node\n"; |
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97
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} |
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98
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# for $document_record ($document_record->getChildrenByTagName('linguisticAnalysis')) { |
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99
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# TODO |
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100
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0
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0
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0
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if ((defined $lingAnalysisLoad) && ($lingAnalysisLoad == 1) && (defined $document_record->getChildrenByTagName('linguisticAnalysis')->get_node(1))) { |
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0
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101
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0
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$self->getAnnotations->loadLinguisticAnalysis($document_record->getChildrenByTagName('linguisticAnalysis')->get_node(1)); |
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102
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} |
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103
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104
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0
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my $relevance_section_node = $document_record->getChildrenByTagName('relevance')->get_node(1); |
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105
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0
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0
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if (defined $relevance_section_node) { |
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106
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0
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$self->getAnnotations->setRelevanceSection($relevance_section_node); |
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107
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} |
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108
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} |
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109
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110
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111
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sub setAnnotations { |
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112
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0
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0
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0
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my ($self) = @_; |
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113
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0
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$self->{'annotations'} = undef; |
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114
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} |
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115
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116
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sub getAnnotations { |
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117
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0
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0
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0
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my ($self) = @_; |
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118
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119
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0
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return($self->{'annotations'}); |
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120
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} |
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121
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122
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sub _char_type_identification { |
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123
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0
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0
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my ($self, $character) = @_; |
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124
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125
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126
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# Definition of the character types |
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127
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0
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my $alpha="[A-Za-z\x{C0}-\x{D6}\x{D8}-\x{F6}\x{F8}-\x{FF}\x{0400}-\x{0482}\x{048A}-\x{04FF}]"; |
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128
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0
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my $num="[0-9]"; |
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129
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0
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my $sep="[ \\s\\t\\n\\r]"; |
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130
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131
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0
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my $current_char_type; |
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132
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my $current_char_type_string; |
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133
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134
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# default is symbol |
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135
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0
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$current_char_type = 4;$current_char_type_string = "symb"; |
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0
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136
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137
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# print STDERR "$character\n"; |
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138
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139
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0
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0
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if($character=~/$alpha/o){$current_char_type = 1;$current_char_type_string = "alpha";}; |
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0
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0
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140
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0
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0
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if($character=~/$num/o){$current_char_type = 2;$current_char_type_string = "num";}; |
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0
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0
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141
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0
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0
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if($character=~/$sep/o){$current_char_type = 3;$current_char_type_string = "sep";}; |
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0
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0
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142
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143
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0
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return($current_char_type, $current_char_type_string); |
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144
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} |
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145
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146
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sub _tokenCreation { |
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147
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0
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0
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my ($self,$current_token_string, $current_token_string_length, $previous_char_type_string, $offset) = @_; |
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148
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149
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# code for the character types |
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150
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# 1: alphabetic |
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151
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# 2: numeric |
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152
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# 3: separator |
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153
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# 4: symbol |
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154
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# 0 : not defined |
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155
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# warn "add token: $current_token_string\n"; |
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156
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157
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158
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# warn "Creation of new token\n"; |
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159
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0
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my $token = Lingua::Ogmios::Annotations::Token->new( |
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160
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{'content' => $current_token_string, |
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161
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'type' => $previous_char_type_string, |
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162
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'from' => $offset, |
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163
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'to' => $offset + $current_token_string_length - 1, |
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164
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}); |
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165
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# $token->print; |
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166
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0
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return($token); |
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167
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} |
|
168
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169
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sub tokenisation { |
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170
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0
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0
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0
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my ($self) = @_; |
|
171
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172
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0
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0
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if ($self->getAnnotations->getTokenLevel->getSize != 0) { |
|
173
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0
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warn "tokens exist - no tokenisation required\n"; |
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174
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0
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return(0); |
|
175
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} |
|
176
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177
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0
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warn "[LOG] Tokenisation (" . $self->getId . ")\n"; |
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178
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179
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0
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my $canonicalDocument = $self->getAnnotations->getCanonicalDocument; |
|
180
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181
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# warn $self->getId . "\n"; |
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182
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# warn $canonicalDocument . "\n"; |
|
183
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184
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0
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|
my @characters = split //, $canonicalDocument; |
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185
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186
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0
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0
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if (scalar @characters) { |
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187
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|
188
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0
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my $character; |
|
189
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|
190
|
0
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|
my $current_token_string = ""; |
|
191
|
0
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|
my $current_token_string_length = 0; |
|
192
|
0
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|
my $current_token_type = 0; |
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193
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0
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|
my $current_char_type = 0; |
|
194
|
0
|
|
|
|
|
|
my $current_char_type_string = ""; |
|
195
|
0
|
|
|
|
|
|
my $previous_char_type = 0; |
|
196
|
0
|
|
|
|
|
|
my $previous_char_type_string = ""; |
|
197
|
0
|
|
|
|
|
|
my $offset = 0; |
|
198
|
|
|
|
|
|
|
|
|
199
|
0
|
|
|
|
|
|
my $current_id; |
|
200
|
|
|
|
|
|
|
my $current_token; |
|
201
|
|
|
|
|
|
|
|
|
202
|
0
|
|
|
|
|
|
$character = $characters[0]; |
|
203
|
0
|
|
|
|
|
|
($current_char_type, $current_char_type_string) = $self->_char_type_identification($character); |
|
204
|
0
|
|
|
|
|
|
$current_token_string_length = 1; |
|
205
|
0
|
|
|
|
|
|
$current_token_string = $character; |
|
206
|
0
|
|
|
|
|
|
$previous_char_type = $current_char_type; |
|
207
|
0
|
|
|
|
|
|
$previous_char_type_string = $current_char_type_string; |
|
208
|
|
|
|
|
|
|
|
|
209
|
0
|
0
|
|
|
|
|
if ($current_char_type == 4) { |
|
210
|
0
|
|
|
|
|
|
$current_token = $self->_tokenCreation($character, 1, $current_char_type_string, $offset); |
|
211
|
0
|
|
|
|
|
|
$current_id = $self->getAnnotations->addToken($current_token); |
|
212
|
0
|
|
|
|
|
|
$current_token_string = "$character"; |
|
213
|
0
|
|
|
|
|
|
$current_token_string_length = 1; |
|
214
|
0
|
|
|
|
|
|
$previous_char_type = $current_char_type; |
|
215
|
0
|
|
|
|
|
|
$previous_char_type_string = $current_char_type_string; |
|
216
|
0
|
|
|
|
|
|
$offset += $current_token_string_length; |
|
217
|
|
|
|
|
|
|
} |
|
218
|
0
|
|
|
|
|
|
my $i; |
|
219
|
0
|
|
|
|
|
|
for($i=1;$i
|
|
220
|
0
|
|
|
|
|
|
$character = $characters[$i]; |
|
221
|
|
|
|
|
|
|
# identification of the type of the current character |
|
222
|
|
|
|
|
|
|
|
|
223
|
0
|
|
|
|
|
|
($current_char_type, $current_char_type_string) = $self->_char_type_identification($character); |
|
224
|
|
|
|
|
|
|
|
|
225
|
0
|
0
|
0
|
|
|
|
if (($current_char_type == $previous_char_type) && ($current_char_type != 4) && |
|
|
|
|
0
|
|
|
|
|
|
|
|
|
0
|
|
|
|
|
|
226
|
|
|
|
|
|
|
(!($self->getAnnotations->getSectionLevel->existsElementFromIndex('from', $offset + $current_token_string_length ))) && |
|
227
|
|
|
|
|
|
|
(!($self->getAnnotations->getSectionLevel->existsElementFromIndex('to', $offset + $current_token_string_length - 1)))) { |
|
228
|
0
|
|
|
|
|
|
$current_token_string .= $character; |
|
229
|
0
|
|
|
|
|
|
$current_token_string_length++; |
|
230
|
|
|
|
|
|
|
} else { |
|
231
|
0
|
0
|
|
|
|
|
if ($previous_char_type != 4) { |
|
232
|
0
|
|
|
|
|
|
$current_token = $self->_tokenCreation($current_token_string, $current_token_string_length, $previous_char_type_string, $offset); |
|
233
|
0
|
|
|
|
|
|
$current_id = $self->getAnnotations->addToken($current_token); |
|
234
|
0
|
|
|
|
|
|
$offset += $current_token_string_length; |
|
235
|
|
|
|
|
|
|
} |
|
236
|
0
|
0
|
|
|
|
|
if ($current_char_type == 4) { |
|
237
|
0
|
|
|
|
|
|
$current_token_string = $character; |
|
238
|
0
|
|
|
|
|
|
$current_token_string_length = 1; |
|
239
|
0
|
|
|
|
|
|
$current_token = $self->_tokenCreation($current_token_string, $current_token_string_length, $current_char_type_string, $offset); |
|
240
|
0
|
|
|
|
|
|
$current_id = $self->getAnnotations->addToken($current_token); |
|
241
|
0
|
|
|
|
|
|
$offset += $current_token_string_length; |
|
242
|
|
|
|
|
|
|
} |
|
243
|
|
|
|
|
|
|
# and create a new token string |
|
244
|
0
|
|
|
|
|
|
$previous_char_type = $current_char_type; |
|
245
|
0
|
|
|
|
|
|
$previous_char_type_string = $current_char_type_string; |
|
246
|
0
|
|
|
|
|
|
$current_token_string = $character; |
|
247
|
0
|
|
|
|
|
|
$current_token_string_length = 1; |
|
248
|
|
|
|
|
|
|
} |
|
249
|
|
|
|
|
|
|
} |
|
250
|
0
|
0
|
|
|
|
|
if ($current_char_type != 4) { |
|
251
|
0
|
|
|
|
|
|
$current_token = $self->_tokenCreation($current_token_string, $current_token_string_length, $previous_char_type_string, $offset); |
|
252
|
0
|
|
|
|
|
|
$current_id = $self->getAnnotations->addToken($current_token); |
|
253
|
|
|
|
|
|
|
} |
|
254
|
|
|
|
|
|
|
} else { |
|
255
|
0
|
|
|
|
|
|
$self->getAnnotations |
|
256
|
|
|
|
|
|
|
} |
|
257
|
|
|
|
|
|
|
|
|
258
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->rebuildIndex(); |
|
259
|
|
|
|
|
|
|
|
|
260
|
0
|
|
|
|
|
|
$self->getAnnotations->addLogProcessing( |
|
261
|
|
|
|
|
|
|
Lingua::Ogmios::Annotations::LogProcessing->new( |
|
262
|
|
|
|
|
|
|
{ 'comments' => 'Found ' . $self->getAnnotations->getTokenLevel->getSize . ' tokens\n', |
|
263
|
|
|
|
|
|
|
'list_modified_level' => ["token_level"], |
|
264
|
|
|
|
|
|
|
} |
|
265
|
|
|
|
|
|
|
) |
|
266
|
|
|
|
|
|
|
); |
|
267
|
|
|
|
|
|
|
# $self->getAnnotations->addLogProcessing( |
|
268
|
|
|
|
|
|
|
# Lingua::Ogmios::Annotations::LogProcessing->new( |
|
269
|
|
|
|
|
|
|
# { 'comments' => 'Found ' . $self->getAnnotations->getSectionLevel->getSize . ' sections\n', |
|
270
|
|
|
|
|
|
|
# } |
|
271
|
|
|
|
|
|
|
# ) |
|
272
|
|
|
|
|
|
|
# ); |
|
273
|
0
|
|
|
|
|
|
$self->getAnnotations->addLogProcessing(Lingua::Ogmios::Annotations::LogProcessing->new( |
|
274
|
|
|
|
|
|
|
{ 'software_name' => 'internal processing', |
|
275
|
|
|
|
|
|
|
'comments' => 'Tokenisation. Can not be change\n', |
|
276
|
|
|
|
|
|
|
'list_modified_level' => ["token_level"], |
|
277
|
|
|
|
|
|
|
})); |
|
278
|
0
|
|
|
|
|
|
warn "[LOG] Check merging identification of the end and start position (1)\n"; |
|
279
|
|
|
|
|
|
|
} |
|
280
|
|
|
|
|
|
|
|
|
281
|
|
|
|
|
|
|
sub tokenisation2 { |
|
282
|
0
|
|
|
0
|
0
|
|
my ($self) = @_; |
|
283
|
|
|
|
|
|
|
|
|
284
|
0
|
|
|
|
|
|
warn "[LOG] Tokenisation2 (" . $self->getId . ")\n"; |
|
285
|
|
|
|
|
|
|
|
|
286
|
0
|
|
|
|
|
|
my $canonicalDocument = $self->getAnnotations->getCanonicalDocument; |
|
287
|
|
|
|
|
|
|
|
|
288
|
0
|
|
|
|
|
|
my @characters = split //, $canonicalDocument; |
|
289
|
|
|
|
|
|
|
|
|
290
|
0
|
|
|
|
|
|
my $character; |
|
291
|
|
|
|
|
|
|
|
|
292
|
0
|
|
|
|
|
|
my $current_token_string = ""; |
|
293
|
0
|
|
|
|
|
|
my $current_token_string_length = 0; |
|
294
|
0
|
|
|
|
|
|
my $current_token_type = 0; |
|
295
|
0
|
|
|
|
|
|
my $current_char_type = 0; |
|
296
|
0
|
|
|
|
|
|
my $current_char_type_string = ""; |
|
297
|
0
|
|
|
|
|
|
my $previous_char_type = 0; |
|
298
|
0
|
|
|
|
|
|
my $previous_char_type_string = ""; |
|
299
|
0
|
|
|
|
|
|
my $offset = 0; |
|
300
|
|
|
|
|
|
|
|
|
301
|
0
|
|
|
|
|
|
my $current_id; |
|
302
|
|
|
|
|
|
|
my $current_token; |
|
303
|
|
|
|
|
|
|
|
|
304
|
0
|
|
|
|
|
|
$self->getAnnotations->addLogProcessing(Lingua::Ogmios::Annotations::LogProcessing->new( |
|
305
|
|
|
|
|
|
|
{ 'software_name' => 'internal processing', |
|
306
|
|
|
|
|
|
|
'comments' => 'Tokenisation. Can not be change\n', |
|
307
|
|
|
|
|
|
|
})); |
|
308
|
0
|
|
|
|
|
|
$character = $characters[0]; |
|
309
|
0
|
|
|
|
|
|
($current_char_type, $current_char_type_string) = $self->_char_type_identification($character); |
|
310
|
0
|
|
|
|
|
|
$current_token_string_length = 1; |
|
311
|
0
|
|
|
|
|
|
$current_token_string = $character; |
|
312
|
0
|
|
|
|
|
|
$previous_char_type = $current_char_type; |
|
313
|
0
|
|
|
|
|
|
$previous_char_type_string = $current_char_type_string; |
|
314
|
|
|
|
|
|
|
|
|
315
|
0
|
0
|
|
|
|
|
if ($current_char_type == 4) { |
|
316
|
0
|
|
|
|
|
|
$current_token = $self->_tokenCreation($character, 1, $current_char_type_string, $offset); |
|
317
|
0
|
|
|
|
|
|
$current_id = $self->getAnnotations->addToken($current_token); |
|
318
|
0
|
|
|
|
|
|
$current_token_string = "$character"; |
|
319
|
0
|
|
|
|
|
|
$current_token_string_length = 1; |
|
320
|
0
|
|
|
|
|
|
$previous_char_type = $current_char_type; |
|
321
|
0
|
|
|
|
|
|
$previous_char_type_string = $current_char_type_string; |
|
322
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getSectionLevel->existsElementFromIndex('from', $offset)) { |
|
323
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('from', $offset, $current_token); |
|
324
|
|
|
|
|
|
|
} |
|
325
|
0
|
|
|
|
|
|
$offset += $current_token_string_length; |
|
326
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getSectionLevel->existsElementFromIndex('to', $offset)) { |
|
327
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $offset, $current_token); |
|
328
|
|
|
|
|
|
|
} |
|
329
|
|
|
|
|
|
|
} |
|
330
|
0
|
|
|
|
|
|
my $i; |
|
331
|
0
|
|
|
|
|
|
for($i=1;$i
|
|
332
|
0
|
|
|
|
|
|
$character = $characters[$i]; |
|
333
|
|
|
|
|
|
|
# identification of the type of the current character |
|
334
|
|
|
|
|
|
|
|
|
335
|
0
|
|
|
|
|
|
($current_char_type, $current_char_type_string) = $self->_char_type_identification($character); |
|
336
|
|
|
|
|
|
|
|
|
337
|
0
|
0
|
0
|
|
|
|
if (($current_char_type == $previous_char_type) && ($current_char_type != 4) && |
|
|
|
|
0
|
|
|
|
|
|
|
|
|
0
|
|
|
|
|
|
338
|
|
|
|
|
|
|
(!($self->getAnnotations->getSectionLevel->existsElementFromIndex('from', $offset + $current_token_string_length ))) && |
|
339
|
|
|
|
|
|
|
(!($self->getAnnotations->getSectionLevel->existsElementFromIndex('to', $offset + $current_token_string_length )))) { |
|
340
|
0
|
|
|
|
|
|
$current_token_string .= $character; |
|
341
|
0
|
|
|
|
|
|
$current_token_string_length++; |
|
342
|
|
|
|
|
|
|
} else { |
|
343
|
0
|
0
|
|
|
|
|
if ($previous_char_type != 4) { |
|
344
|
0
|
|
|
|
|
|
$current_token = $self->_tokenCreation($current_token_string, $current_token_string_length, $previous_char_type_string, $offset); |
|
345
|
0
|
|
|
|
|
|
$current_id = $self->getAnnotations->addToken($current_token); |
|
346
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getSectionLevel->existsElementFromIndex('from', $offset)) { |
|
347
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('from', $offset, $current_token); |
|
348
|
|
|
|
|
|
|
} |
|
349
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getSectionLevel->existsElementFromIndex('to', $offset + $current_token_string_length)) { |
|
350
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $offset + $current_token_string_length, $current_token); |
|
351
|
|
|
|
|
|
|
} |
|
352
|
0
|
|
|
|
|
|
$offset += $current_token_string_length; |
|
353
|
|
|
|
|
|
|
} |
|
354
|
0
|
0
|
|
|
|
|
if ($current_char_type == 4) { |
|
355
|
0
|
|
|
|
|
|
$current_token_string = $character; |
|
356
|
0
|
|
|
|
|
|
$current_token_string_length = 1; |
|
357
|
0
|
|
|
|
|
|
$current_token = $self->_tokenCreation($current_token_string, $current_token_string_length, $current_char_type_string, $offset); |
|
358
|
0
|
|
|
|
|
|
$current_id = $self->getAnnotations->addToken($current_token); |
|
359
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getSectionLevel->existsElementFromIndex('from', $offset)) { |
|
360
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('from', $offset, $current_token); |
|
361
|
|
|
|
|
|
|
} |
|
362
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getSectionLevel->existsElementFromIndex('to', $offset + $current_token_string_length)) { |
|
363
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $offset + $current_token_string_length, $current_token); |
|
364
|
|
|
|
|
|
|
} |
|
365
|
0
|
|
|
|
|
|
$offset += $current_token_string_length; |
|
366
|
|
|
|
|
|
|
} |
|
367
|
|
|
|
|
|
|
# and create a new token string |
|
368
|
0
|
|
|
|
|
|
$previous_char_type = $current_char_type; |
|
369
|
0
|
|
|
|
|
|
$previous_char_type_string = $current_char_type_string; |
|
370
|
0
|
|
|
|
|
|
$current_token_string = $character; |
|
371
|
0
|
|
|
|
|
|
$current_token_string_length = 1; |
|
372
|
|
|
|
|
|
|
} |
|
373
|
|
|
|
|
|
|
} |
|
374
|
0
|
0
|
|
|
|
|
if ($current_char_type != 4) { |
|
375
|
0
|
|
|
|
|
|
$current_token = $self->_tokenCreation($current_token_string, $current_token_string_length, $previous_char_type_string, $offset); |
|
376
|
0
|
|
|
|
|
|
$current_id = $self->getAnnotations->addToken($current_token); |
|
377
|
|
|
|
|
|
|
} |
|
378
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getSectionLevel->existsElementFromIndex('from', $offset + $current_token_string_length)) { |
|
379
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('from', $offset + $current_token_string_length, $current_token); |
|
380
|
|
|
|
|
|
|
} |
|
381
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getSectionLevel->existsElementFromIndex('to', $offset + $current_token_string_length)) { |
|
382
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $offset + $current_token_string_length, $current_token); |
|
383
|
|
|
|
|
|
|
} |
|
384
|
|
|
|
|
|
|
|
|
385
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->rebuildIndex(); |
|
386
|
|
|
|
|
|
|
|
|
387
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getTokenLevel->getSize == 0) { |
|
388
|
|
|
|
|
|
|
|
|
389
|
0
|
|
|
|
|
|
$self->getAnnotations->addLogProcessing( |
|
390
|
|
|
|
|
|
|
Lingua::Ogmios::Annotations::LogProcessing->new( |
|
391
|
|
|
|
|
|
|
{ 'comments' => 'Found ' . $self->getAnnotations->getTokenLevel->getSize . ' tokens\n', |
|
392
|
|
|
|
|
|
|
} |
|
393
|
|
|
|
|
|
|
) |
|
394
|
|
|
|
|
|
|
); |
|
395
|
0
|
|
|
|
|
|
$self->getAnnotations->addLogProcessing( |
|
396
|
|
|
|
|
|
|
Lingua::Ogmios::Annotations::LogProcessing->new( |
|
397
|
|
|
|
|
|
|
{ 'comments' => 'Found ' . $self->getAnnotations->getSectionLevel->getSize . ' sections\n', |
|
398
|
|
|
|
|
|
|
} |
|
399
|
|
|
|
|
|
|
) |
|
400
|
|
|
|
|
|
|
); |
|
401
|
|
|
|
|
|
|
} |
|
402
|
0
|
|
|
|
|
|
warn "[LOG] Check merging identification of the end and start position (2)\n"; |
|
403
|
|
|
|
|
|
|
} |
|
404
|
|
|
|
|
|
|
|
|
405
|
|
|
|
|
|
|
sub computeSectionFromToken { |
|
406
|
0
|
|
|
0
|
0
|
|
my ($self, $record_log) = @_; |
|
407
|
|
|
|
|
|
|
|
|
408
|
0
|
|
|
|
|
|
warn "[LOG] Compute Section Ref From Tokens (" . $self->getId . ")\n"; |
|
409
|
|
|
|
|
|
|
|
|
410
|
0
|
|
|
|
|
|
my $token; |
|
411
|
0
|
|
|
|
|
|
my $lasttoken = $self->getAnnotations->getTokenLevel->getLastElement; |
|
412
|
0
|
|
|
|
|
|
my $section; |
|
413
|
0
|
|
|
|
|
|
foreach $section (@{$self->getAnnotations->getSectionLevel->getElements}) { |
|
|
0
|
|
|
|
|
|
|
|
414
|
|
|
|
|
|
|
# warn "check for section " . $section->getId . " (" . $section->getFrom . " - " . $section->getTo . ")\n"; |
|
415
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getTokenLevel->existsElementFromIndex('from', $section->getFrom)) { |
|
416
|
0
|
|
|
|
|
|
$token = $self->getAnnotations->getTokenLevel->getElementFromIndex('from', $section->getFrom)->[0]; |
|
417
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('from', $token->getFrom, $token); |
|
418
|
|
|
|
|
|
|
# } else { |
|
419
|
|
|
|
|
|
|
# die "==> " . $section->getFrom . "\n"; |
|
420
|
|
|
|
|
|
|
} |
|
421
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getTokenLevel->existsElementFromIndex('to', $section->getTo)) { |
|
422
|
0
|
|
|
|
|
|
$token = $self->getAnnotations->getTokenLevel->getElementFromIndex('to', $section->getTo)->[0]; |
|
423
|
|
|
|
|
|
|
#warn "in to\n"; |
|
424
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $token->getTo, $token); |
|
425
|
|
|
|
|
|
|
} else { |
|
426
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getTokenLevel->existsElementFromIndex('from', $section->getTo)) { |
|
427
|
0
|
|
|
|
|
|
$token = $self->getAnnotations->getTokenLevel->getElementFromIndex('from', $section->getTo)->[0]; |
|
428
|
0
|
0
|
|
|
|
|
if (defined $token->previous) { |
|
429
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $token->getFrom, $token->previous); |
|
430
|
|
|
|
|
|
|
} else { |
|
431
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $token->getFrom, $token); |
|
432
|
|
|
|
|
|
|
} |
|
433
|
0
|
|
|
|
|
|
warn "ok\n"; |
|
434
|
|
|
|
|
|
|
} else { |
|
435
|
0
|
0
|
|
|
|
|
if (ref($section->getTo) eq "Lingua::Ogmios::Annotations::Token") { |
|
436
|
|
|
|
|
|
|
# $self->getAnnotations->getSectionLevel->addElementToIndex($section->getTo,'to'); |
|
437
|
|
|
|
|
|
|
} else { |
|
438
|
0
|
0
|
|
|
|
|
if ($self->getAnnotations->getTokenLevel->existsElementFromIndex('to', $section->getTo - 1)) { |
|
|
|
0
|
|
|
|
|
|
|
439
|
0
|
|
|
|
|
|
$token = $self->getAnnotations->getTokenLevel->getElementFromIndex('to', $section->getTo - 1)->[0]; |
|
440
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $section->getTo, $token); |
|
441
|
|
|
|
|
|
|
# } elsif ($self->getAnnotations->getTokenLevel->existsElementFromIndex('to', $section->getTo + 1)) { |
|
442
|
|
|
|
|
|
|
# $token = $self->getAnnotations->getTokenLevel->getElementFromIndex('to', $section->getTo + 1)->[0]; |
|
443
|
|
|
|
|
|
|
# $self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $section->getTo, $token); |
|
444
|
0
|
|
|
|
|
|
warn "ok2\n"; |
|
445
|
|
|
|
|
|
|
} elsif ($self->getAnnotations->getTokenLevel->existsElementFromIndex('to', $section->getTo + 1)) { |
|
446
|
0
|
|
|
|
|
|
$token = $self->getAnnotations->getTokenLevel->getElementFromIndex('to', $section->getTo + 1)->[0]; |
|
447
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $section->getTo, $token); |
|
448
|
|
|
|
|
|
|
} else { |
|
449
|
0
|
|
|
|
|
|
warn "set to last token\n"; |
|
450
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->changeRefFromIndexField('to', $section->getTo, $lasttoken); |
|
451
|
|
|
|
|
|
|
# die "==> " . $section->getTo->getContent . "\n"; |
|
452
|
|
|
|
|
|
|
} |
|
453
|
|
|
|
|
|
|
} |
|
454
|
|
|
|
|
|
|
} |
|
455
|
|
|
|
|
|
|
# } else { |
|
456
|
|
|
|
|
|
|
# warn "not defined\n"; |
|
457
|
|
|
|
|
|
|
# } |
|
458
|
|
|
|
|
|
|
} |
|
459
|
|
|
|
|
|
|
# warn "Check for corrected section " . $section->getId . " (" . $section->getFrom . " - " . $section->getTo . ")\n"; |
|
460
|
|
|
|
|
|
|
|
|
461
|
|
|
|
|
|
|
# warn "Last token " . $lasttoken->getId . " (" . $lasttoken->getFrom . " - " . $lasttoken->getTo . ")\n"; |
|
462
|
|
|
|
|
|
|
# warn "Check for corrected section " . $section->getId . " (" . $section->getFrom . " - " . $section->getTo . ")\n"; |
|
463
|
|
|
|
|
|
|
# warn ".\n"; |
|
464
|
|
|
|
|
|
|
} |
|
465
|
|
|
|
|
|
|
# exit; |
|
466
|
|
|
|
|
|
|
# warn "===\n"; |
|
467
|
0
|
|
|
|
|
|
$self->getAnnotations->getSectionLevel->rebuildIndex(); |
|
468
|
|
|
|
|
|
|
# warn "+++\n"; |
|
469
|
0
|
0
|
|
|
|
|
if ($record_log) { |
|
470
|
0
|
|
|
|
|
|
$self->getAnnotations->addLogProcessing( |
|
471
|
|
|
|
|
|
|
Lingua::Ogmios::Annotations::LogProcessing->new( |
|
472
|
|
|
|
|
|
|
{ 'comments' => 'Found ' . $self->getAnnotations->getSectionLevel->getSize . ' sections\n', |
|
473
|
|
|
|
|
|
|
'list_modified_level' => ["section_level"], |
|
474
|
|
|
|
|
|
|
} |
|
475
|
|
|
|
|
|
|
) |
|
476
|
|
|
|
|
|
|
); |
|
477
|
|
|
|
|
|
|
} |
|
478
|
0
|
|
|
|
|
|
warn "[LOG] Check merging identification of the end and start position (3)\n"; |
|
479
|
|
|
|
|
|
|
} |
|
480
|
|
|
|
|
|
|
|
|
481
|
|
|
|
|
|
|
|
|
482
|
|
|
|
|
|
|
sub XMLout { |
|
483
|
0
|
|
|
0
|
0
|
|
my ($self) = @_; |
|
484
|
|
|
|
|
|
|
|
|
485
|
0
|
|
|
|
|
|
my $str; |
|
486
|
|
|
|
|
|
|
my $attr; |
|
487
|
|
|
|
|
|
|
|
|
488
|
0
|
|
|
|
|
|
$str = '
|
|
489
|
0
|
|
|
|
|
|
foreach $attr (@{$self->getAttributes}) { |
|
|
0
|
|
|
|
|
|
|
|
490
|
0
|
|
|
|
|
|
$str .= " " . $attr->{'nodeName'} . '="' . $attr->{'value'} . '"'; |
|
491
|
|
|
|
|
|
|
} |
|
492
|
0
|
|
|
|
|
|
$str .= ">\n"; |
|
493
|
|
|
|
|
|
|
|
|
494
|
0
|
|
|
|
|
|
$str .= $self->getAnnotations->XMLout; |
|
495
|
0
|
|
|
|
|
|
$str .= " \n"; |
|
496
|
|
|
|
|
|
|
|
|
497
|
0
|
|
|
|
|
|
return($str); |
|
498
|
|
|
|
|
|
|
} |
|
499
|
|
|
|
|
|
|
|
|
500
|
|
|
|
|
|
|
|
|
501
|
|
|
|
|
|
|
1; |
|
502
|
|
|
|
|
|
|
|
|
503
|
|
|
|
|
|
|
__END__ |