File Coverage

blib/lib/Bio/Chado/Schema/Result/Sequence/Featureloc.pm

Criterion	Covered	Total	%
statement	17	17	100.0
branch	1	2	50.0
condition	1	3	33.3
subroutine	7	7	100.0
pod	1	1	100.0
total	27	30	90.0

package Bio::Chado::Schema::Result::Sequence::Featureloc;
BEGIN {
  $Bio::Chado::Schema::Result::Sequence::Featureloc::AUTHORITY = 'cpan:RBUELS';
}
BEGIN {
  $Bio::Chado::Schema::Result::Sequence::Featureloc::VERSION = '0.08001'; # TRIAL
}

# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE

use strict;
use warnings;

use base 'DBIx::Class::Core';



__PACKAGE__->table("featureloc");


__PACKAGE__->add_columns(
  "featureloc_id",
  {
    data_type         => "integer",
    is_auto_increment => 1,
    is_nullable       => 0,
    sequence          => "featureloc_featureloc_id_seq",
  },
  "feature_id",
  { data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
  "srcfeature_id",
  { data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
  "fmin",
  { data_type => "integer", is_nullable => 1 },
  "is_fmin_partial",
  { data_type => "boolean", default_value => \"false", is_nullable => 0 },
  "fmax",
  { data_type => "integer", is_nullable => 1 },
  "is_fmax_partial",
  { data_type => "boolean", default_value => \"false", is_nullable => 0 },
  "strand",
  { data_type => "smallint", is_nullable => 1 },
  "phase",
  { data_type => "integer", is_nullable => 1 },
  "residue_info",
  { data_type => "text", is_nullable => 1 },
  "locgroup",
  { data_type => "integer", default_value => 0, is_nullable => 0 },
  "rank",
  { data_type => "integer", default_value => 0, is_nullable => 0 },
);
__PACKAGE__->set_primary_key("featureloc_id");
__PACKAGE__->add_unique_constraint("featureloc_c1", ["feature_id", "locgroup", "rank"]);


__PACKAGE__->belongs_to(
  "feature",
  "Bio::Chado::Schema::Result::Sequence::Feature",
  { feature_id => "feature_id" },
  {
    cascade_copy   => 0,
    cascade_delete => 0,
    is_deferrable  => 1,
    on_delete      => "CASCADE",
    on_update      => "CASCADE",
  },
);


__PACKAGE__->belongs_to(
  "srcfeature",
  "Bio::Chado::Schema::Result::Sequence::Feature",
  { feature_id => "srcfeature_id" },
  {
    cascade_copy   => 0,
    cascade_delete => 0,
    is_deferrable  => 1,
    join_type      => "LEFT",
    on_delete      => "CASCADE",
    on_update      => "CASCADE",
  },
);


__PACKAGE__->has_many(
  "featureloc_pubs",
  "Bio::Chado::Schema::Result::Sequence::FeaturelocPub",
  { "foreign.featureloc_id" => "self.featureloc_id" },
  { cascade_copy => 0, cascade_delete => 0 },
);


# Created by DBIx::Class::Schema::Loader v0.06001 @ 2010-04-16 14:33:36
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:VED7G1XykKNri3GIOYY5NQ



sub length {
    my $self = shift;
    no warnings 'uninitialized';
    return undef unless defined($self->fmax) && defined($self->fmin);
    return $self->fmax - $self->fmin;
}


# You can replace this text with custom content, and it will be preserved on regeneration
1;

__END__