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package Treex::Tool::Parser::MSTperl::Labeller; |
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{ |
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$Treex::Tool::Parser::MSTperl::Labeller::VERSION = '0.11949'; |
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} |
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2552
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use Moose; |
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use Carp; |
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use Treex::Tool::Parser::MSTperl::Sentence; |
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use Treex::Tool::Parser::MSTperl::Edge; |
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use Treex::Tool::Parser::MSTperl::ModelLabelling; |
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has config => ( |
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isa => 'Treex::Tool::Parser::MSTperl::Config', |
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is => 'ro', |
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required => '1', |
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); |
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has model => ( |
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isa => 'Maybe[Treex::Tool::Parser::MSTperl::ModelLabelling]', |
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is => 'rw', |
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); |
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sub BUILD { |
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my ($self) = @_; |
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$self->model( |
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Treex::Tool::Parser::MSTperl::ModelLabelling->new( |
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config => $self->config, |
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) |
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); |
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return; |
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} |
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sub load_model { |
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# (Str $filename) |
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my ( $self, $filename ) = @_; |
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return $self->model->load($filename); |
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} |
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sub load_model_tsv { |
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# (Str $filename) |
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my ( $self, $filename ) = @_; |
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return $self->model->load_tsv($filename); |
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} |
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sub label_sentence { |
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# (Treex::Tool::Parser::MSTperl::Sentence $sentence) |
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my ( $self, $sentence ) = @_; |
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# parse sentence (does not modify $sentence) |
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my $sentence_labelled = $self->label_sentence_internal($sentence); |
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return $sentence_labelled->toLabelsArray(); |
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} |
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sub label_sentence_internal { |
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# (Treex::Tool::Parser::MSTperl::Sentence $sentence) |
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my ( $self, $sentence ) = @_; |
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if ( !$self->model ) { |
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croak "MSTperl parser error: There is no model for labelling!"; |
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} |
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# copy the sentence (do not modify $sentence directly) |
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my $sentence_working_copy = $sentence->copy_nonlabelled(); |
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$sentence_working_copy->fill_fields_before_labelling(); |
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if ( $self->config->DEBUG >= 2 ) { |
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print "Labelling sentence: " |
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. ( join ' ', map { $_->fields->[1] } @{ $sentence->nodes } ) |
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. " \n"; |
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} |
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# take root's children, find best scoring labelling sequence, recursion |
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my $root = $sentence_working_copy->getNodeByOrd(0); |
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$self->label_subtree($root); |
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return $sentence_working_copy; |
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} |
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# assign labels to edges going from the $parent node to its children |
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# (and recurse on the children) |
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# directly modifies the sentence (or better: the nodes within the sentence) |
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sub label_subtree { |
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# (Treex::Tool::Parser::MSTperl::Node $parent) |
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my ( $self, $parent ) = @_; |
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my $ALGORITHM = $self->config->labeller_algorithm; |
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if ( $self->config->DEBUG >= 2 ) { |
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print "Label subtree of node number " . $parent->ord . ' ' |
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. $parent->fields->[1] . "\n"; |
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} |
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104
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my @edges = @{ $parent->children }; |
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if ( $self->config->DEBUG >= 3 ) { |
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print "There are " . scalar(@edges) . " children edges \n"; |
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} |
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if ( @edges == 0 ) { |
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return; |
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} |
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# label the nodes using Viterbi algorithm |
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# (this is my own implementation of Viterbi, fitted for this task) |
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# States structure: for each state (its key being a label) |
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# there is an array with the current best path to it as 'path' (append-only) |
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# and its current score 'score' (computed somehow, |
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# i.e. differently for different algorithms) |
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my $states = {}; |
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my $starting_state_key = $self->config->SEQUENCE_BOUNDARY_LABEL; |
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# correspond to algorithms |
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my @starting_scores = ( |
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126
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# 0 1 2 3 4 5 6 7 8 9 |
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1e300, 1, 1, 1e300, 1e300, 1e300, -1, -1, 0, 0, |
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# 10 11 12 13 14 15 16 17 18 19 20 21 |
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1e300, 1e300, 1e300, 1e300, 1e300, 1e300, 0, 0, 0, 1, 0, 0, |
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); |
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# path could be constructed by backpointers |
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# but one would have to keep all the states the whole time |
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$states->{$starting_state_key} = { |
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'path' => [ $self->config->SEQUENCE_BOUNDARY_LABEL ], |
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'score' => $starting_scores[$ALGORITHM], |
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}; |
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140
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# run Viterbi |
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# In each cycle generates %new_states and sets them as %states, |
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# so at the end it suffices to find the state with the best score in %states |
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# and use its path as the result. |
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my $prev_edge = undef; |
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foreach my $edge (@edges) { |
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147
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# only progress and/or debug info |
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if ( $self->config->DEBUG >= 3 ) { |
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print " Labelling edge to node " |
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. $edge->child->ord . ' ' . $edge->child->fields->[1] . "\n"; |
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print " Currently there are " |
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. ( keys %$states ) . " states\n"; |
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} |
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155
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# do one Viterbi step - assign possible labels to $edge |
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# (including appropriate scores of course) |
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$states = $self->label_edge( $edge, $states, $prev_edge ); |
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159
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if ( $ALGORITHM == 20 ) { |
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161
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# set the best label |
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my $best_state_label = $self->find_best_state_label($states); |
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$edge->child->label($best_state_label); |
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} |
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166
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$prev_edge = $edge; |
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} |
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169
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# TODO: foreach last state multiply its score |
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# by the label->sequence_boundary probability |
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172
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if ( $ALGORITHM != 20 ) { |
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174
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# End - find the state with the best score - this is the result |
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my $best_state_label = $self->find_best_state_label($states); |
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177
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if ($best_state_label) { |
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179
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my @labels = @{ $states->{$best_state_label}->{'path'} }; |
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181
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# get rid of SEQUENCE_BOUNDARY_LABEL |
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shift @labels; |
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184
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# only progress and/or debug info |
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if ( $self->config->DEBUG >= 2 ) { |
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print "best state $best_state_label score: " . "\n"; |
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print "best path: " |
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. ( join ' ', @labels ) |
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. "\n"; |
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} |
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192
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foreach my $edge (@edges) { |
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my $label = shift @labels; |
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$edge->child->label($label) |
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} |
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197
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} else { |
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199
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# TODO do not die, provide some backoff instead |
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# (do some smoothing, at least when no states are generated) |
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print "No best state generated, cannot label the sentence!" |
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. " (This is weird.)\n"; |
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} |
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} # else: edges are labelled in each step |
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206
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# end of Viterbi |
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208
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# recursion |
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foreach my $edge (@edges) { |
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$self->label_subtree( $edge->child ); |
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} |
212
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213
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return; |
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} |
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216
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sub find_best_state_label { |
217
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218
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my ( $self, $states ) = @_; |
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220
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# "negative infinity" (works both with real probs and with their logs) |
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my $best_state_score = -999999999; |
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my $best_state_label = undef; |
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224
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foreach my $state_label ( keys %$states ) { |
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if ( $self->config->DEBUG >= 4 ) { |
226
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print "state $state_label score: " |
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. $states->{$state_label}->{'score'} . "\n"; |
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} |
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if ( $states->{$state_label}->{'score'} > $best_state_score ) { |
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$best_state_label = $state_label; |
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$best_state_score = $states->{$state_label}->{'score'}; |
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} |
233
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} |
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235
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# only progress and/or debug info |
236
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if ( $self->config->DEBUG >= 2 ) { |
237
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print "best state $best_state_label score: " |
238
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. $best_state_score . "\n"; |
239
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} |
240
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241
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return $best_state_label; |
242
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} |
243
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244
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# used as an internal part of label_subtree |
245
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# to get all probable labels for an edge |
246
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# i.e. make one step of the Viterbi algorithm |
247
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sub label_edge { |
248
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249
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my ( $self, $edge, $states, $prev_edge ) = @_; |
250
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251
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my $ALGORITHM = $self->config->labeller_algorithm; |
252
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my $new_states = {}; |
253
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foreach my $last_state ( keys %$states ) { |
254
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255
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if ( $ALGORITHM == 21 && defined $prev_edge ) { |
256
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257
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# set last label |
258
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my $best_prev_state_label = $self->find_best_state_label($states); |
259
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$prev_edge->child->label($best_prev_state_label); |
260
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} |
261
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262
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# only progress and/or debug info |
263
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if ( $self->config->DEBUG >= 4 ) { |
264
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print " Processing state $last_state (score " |
265
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. $states->{$last_state}->{'score'} . ")\n"; |
266
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} |
267
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268
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# compute the possible labels scores (typically probabilities), |
269
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# i.e. products of emission and transition probs |
270
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# possible_labels{label} = score |
271
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my %possible_labels = %{ |
272
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$self->get_possible_labels( |
273
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$edge, |
274
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$last_state, |
275
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$states->{$last_state}->{'score'}, |
276
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) |
277
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}; |
278
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279
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# only progress and/or debug info |
280
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if ( $self->config->DEBUG >= 4 ) { |
281
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print " " . scalar( keys %possible_labels ) |
282
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. " possible labels are " |
283
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. ( join ' ', keys %possible_labels ) |
284
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. "\n"; |
285
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} |
286
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287
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foreach my $new_label ( keys %possible_labels ) { |
288
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|
my $new_state_score = $possible_labels{$new_label}; |
289
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290
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# only progress and/or debug info |
291
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if ( $self->config->DEBUG >= 5 ) { |
292
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print " Trying label $new_label, " |
293
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|
. "score $new_state_score\n"; |
294
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print " Old state path " |
295
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|
|
. ( join ' ', @{ $states->{$last_state}->{'path'} } ) |
296
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. " \n"; |
297
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print " Old states: " |
298
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|
. ( |
299
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join ' ', |
300
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|
map { |
301
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|
"$_ (" . ( |
302
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|
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|
|
join ' ', @{ $states->{$_}->{'path'} } |
303
|
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) . ")" |
304
|
|
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} keys %$states |
305
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) |
306
|
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|
. " \n"; |
307
|
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|
|
print " New states: " |
308
|
|
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|
|
|
|
. ( |
309
|
|
|
|
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|
|
join ' ', |
310
|
|
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|
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|
|
map { |
311
|
|
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|
|
|
"$_ (" . ( |
312
|
|
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|
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|
|
join ' ', @{ $new_states->{$_}->{'path'} } |
313
|
|
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|
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|
|
) . ")" |
314
|
|
|
|
|
|
|
} keys %$new_states |
315
|
|
|
|
|
|
|
) |
316
|
|
|
|
|
|
|
. " \n"; |
317
|
|
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|
|
|
|
} |
318
|
|
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|
|
|
|
|
319
|
|
|
|
|
|
|
# test if this is the best |
320
|
|
|
|
|
|
|
if (defined $new_states->{$new_label} |
321
|
|
|
|
|
|
|
&& $new_states->{$new_label}->{'score'} > $new_state_score |
322
|
|
|
|
|
|
|
) |
323
|
|
|
|
|
|
|
{ |
324
|
|
|
|
|
|
|
|
325
|
|
|
|
|
|
|
# there is already the same state state |
326
|
|
|
|
|
|
|
# with higher score |
327
|
|
|
|
|
|
|
next; |
328
|
|
|
|
|
|
|
} |
329
|
|
|
|
|
|
|
|
330
|
|
|
|
|
|
|
# else such a state is not yet there resp. it is but its score |
331
|
|
|
|
|
|
|
# is lower than $new_state_score -> set it (resp. replace it) |
332
|
|
|
|
|
|
|
|
333
|
|
|
|
|
|
|
my @new_state_path = @{ $states->{$last_state}->{'path'} }; |
334
|
|
|
|
|
|
|
push @new_state_path, $new_label; |
335
|
|
|
|
|
|
|
$new_states->{$new_label} = { |
336
|
|
|
|
|
|
|
'path' => \@new_state_path, |
337
|
|
|
|
|
|
|
'score' => $new_state_score, |
338
|
|
|
|
|
|
|
}; |
339
|
|
|
|
|
|
|
|
340
|
|
|
|
|
|
|
# only progress and/or debug info |
341
|
|
|
|
|
|
|
if ( $self->config->DEBUG >= 5 ) { |
342
|
|
|
|
|
|
|
print " New state path " |
343
|
|
|
|
|
|
|
. ( join ' ', @new_state_path ) |
344
|
|
|
|
|
|
|
. " \n"; |
345
|
|
|
|
|
|
|
print " Old states: " |
346
|
|
|
|
|
|
|
. ( |
347
|
|
|
|
|
|
|
join ' ', |
348
|
|
|
|
|
|
|
map { |
349
|
|
|
|
|
|
|
"$_ (" . ( |
350
|
|
|
|
|
|
|
join ' ', @{ $states->{$_}->{'path'} } |
351
|
|
|
|
|
|
|
) . ")" |
352
|
|
|
|
|
|
|
} keys %$states |
353
|
|
|
|
|
|
|
) |
354
|
|
|
|
|
|
|
. " \n"; |
355
|
|
|
|
|
|
|
print " New states: " |
356
|
|
|
|
|
|
|
. ( |
357
|
|
|
|
|
|
|
join ' ', |
358
|
|
|
|
|
|
|
map { |
359
|
|
|
|
|
|
|
"$_ (" . ( |
360
|
|
|
|
|
|
|
join ' ', @{ $new_states->{$_}->{'path'} } |
361
|
|
|
|
|
|
|
) . ")" |
362
|
|
|
|
|
|
|
} keys %$new_states |
363
|
|
|
|
|
|
|
) |
364
|
|
|
|
|
|
|
. " \n"; |
365
|
|
|
|
|
|
|
} |
366
|
|
|
|
|
|
|
} # foreach $new_label |
367
|
|
|
|
|
|
|
|
368
|
|
|
|
|
|
|
# only progress and/or debug info |
369
|
|
|
|
|
|
|
if ( $self->config->DEBUG >= 4 ) { |
370
|
|
|
|
|
|
|
print " Now there are " |
371
|
|
|
|
|
|
|
. ( keys %$new_states ) . " new states\n"; |
372
|
|
|
|
|
|
|
} |
373
|
|
|
|
|
|
|
} # foreach $last_state |
374
|
|
|
|
|
|
|
|
375
|
|
|
|
|
|
|
$new_states = $self->prune($new_states); |
376
|
|
|
|
|
|
|
|
377
|
|
|
|
|
|
|
return $new_states; |
378
|
|
|
|
|
|
|
} |
379
|
|
|
|
|
|
|
|
380
|
|
|
|
|
|
|
# prune the states (keep only some of the best) |
381
|
|
|
|
|
|
|
sub prune { |
382
|
|
|
|
|
|
|
|
383
|
|
|
|
|
|
|
my ( $self, $states ) = @_; |
384
|
|
|
|
|
|
|
|
385
|
|
|
|
|
|
|
# pruning |
386
|
|
|
|
|
|
|
|
387
|
|
|
|
|
|
|
# pruning type 1 commented out because emission scores are not probs |
388
|
|
|
|
|
|
|
# (they do not sum up to 1) |
389
|
|
|
|
|
|
|
# |
390
|
|
|
|
|
|
|
# pruning: keep as many best states so that their normed prob |
391
|
|
|
|
|
|
|
# sums up to at least $VITERBI_STATES_PROB_SUM_THRESHOLD |
392
|
|
|
|
|
|
|
# %states = (); |
393
|
|
|
|
|
|
|
# my @best_states = sort { |
394
|
|
|
|
|
|
|
# $new_states{$b}->{'score'} |
395
|
|
|
|
|
|
|
# <=> $new_states{$a}->{'score'} |
396
|
|
|
|
|
|
|
# } keys %new_states; |
397
|
|
|
|
|
|
|
# my $prob_sum = 0; |
398
|
|
|
|
|
|
|
# foreach my $state (@best_states) { |
399
|
|
|
|
|
|
|
# $prob_sum += $new_states{$state}->{'score'}; |
400
|
|
|
|
|
|
|
# } |
401
|
|
|
|
|
|
|
# my $threshold = $prob_sum |
402
|
|
|
|
|
|
|
# * $VITERBI_STATES_PROB_SUM_THRESHOLD; |
403
|
|
|
|
|
|
|
# my $best_prob_sum = 0; |
404
|
|
|
|
|
|
|
# while ($best_prob_sum < $threshold) { |
405
|
|
|
|
|
|
|
# my $state = shift @best_states; |
406
|
|
|
|
|
|
|
# $states{$state} = $new_states{$state}; |
407
|
|
|
|
|
|
|
# $best_prob_sum += $new_states{$state}->{'score'}; |
408
|
|
|
|
|
|
|
# } |
409
|
|
|
|
|
|
|
|
410
|
|
|
|
|
|
|
# states going form pruning phase 1 to pruning phase 2 |
411
|
|
|
|
|
|
|
# %new_states = %states; |
412
|
|
|
|
|
|
|
|
413
|
|
|
|
|
|
|
# simple pruning: keep n best states |
414
|
|
|
|
|
|
|
my $new_states = {}; |
415
|
|
|
|
|
|
|
my @best_states |
416
|
|
|
|
|
|
|
= sort { |
417
|
|
|
|
|
|
|
$states->{$b}->{'score'} <=> $states->{$a}->{'score'} |
418
|
|
|
|
|
|
|
} keys %$states; |
419
|
|
|
|
|
|
|
for ( |
420
|
|
|
|
|
|
|
my $i = 0; |
421
|
|
|
|
|
|
|
@best_states && $i < $self->config->VITERBI_STATES_NUM_THRESHOLD; |
422
|
|
|
|
|
|
|
$i++ |
423
|
|
|
|
|
|
|
) |
424
|
|
|
|
|
|
|
{ |
425
|
|
|
|
|
|
|
my $state = shift @best_states; |
426
|
|
|
|
|
|
|
$new_states->{$state} = $states->{$state}; |
427
|
|
|
|
|
|
|
|
428
|
|
|
|
|
|
|
# only progress and/or debug info |
429
|
|
|
|
|
|
|
if ( $self->config->DEBUG >= 5 ) { |
430
|
|
|
|
|
|
|
print " Pruning let thrgough the state $state" |
431
|
|
|
|
|
|
|
. "\n"; |
432
|
|
|
|
|
|
|
} |
433
|
|
|
|
|
|
|
} |
434
|
|
|
|
|
|
|
|
435
|
|
|
|
|
|
|
# only progress and/or debug info |
436
|
|
|
|
|
|
|
if ( $self->config->DEBUG >= 4 ) { |
437
|
|
|
|
|
|
|
print " After pruning there are " |
438
|
|
|
|
|
|
|
. ( keys %$new_states ) . " states\n"; |
439
|
|
|
|
|
|
|
} |
440
|
|
|
|
|
|
|
|
441
|
|
|
|
|
|
|
return $new_states; |
442
|
|
|
|
|
|
|
} |
443
|
|
|
|
|
|
|
|
444
|
|
|
|
|
|
|
# computes possible labels for an edge, using info about |
445
|
|
|
|
|
|
|
# the emission scores, transition scores and last state's score |
446
|
|
|
|
|
|
|
sub get_possible_labels { |
447
|
|
|
|
|
|
|
my ( $self, $edge, $previous_label, $previous_label_score ) = @_; |
448
|
|
|
|
|
|
|
|
449
|
|
|
|
|
|
|
my $ALGORITHM = $self->config->labeller_algorithm; |
450
|
|
|
|
|
|
|
|
451
|
|
|
|
|
|
|
if ($ALGORITHM == 8 |
452
|
|
|
|
|
|
|
|| $ALGORITHM == 9 |
453
|
|
|
|
|
|
|
|| $ALGORITHM == 16 |
454
|
|
|
|
|
|
|
|| $ALGORITHM == 17 |
455
|
|
|
|
|
|
|
|| $ALGORITHM == 18 |
456
|
|
|
|
|
|
|
|| $ALGORITHM == 19 |
457
|
|
|
|
|
|
|
|| $ALGORITHM >= 20 |
458
|
|
|
|
|
|
|
) |
459
|
|
|
|
|
|
|
{ |
460
|
|
|
|
|
|
|
|
461
|
|
|
|
|
|
|
my $result = {}; |
462
|
|
|
|
|
|
|
my $all_labels = $self->model->get_all_labels(); |
463
|
|
|
|
|
|
|
|
464
|
|
|
|
|
|
|
# foreach possible label (actually foreach existing label) |
465
|
|
|
|
|
|
|
foreach my $label ( @{$all_labels} ) { |
466
|
|
|
|
|
|
|
|
467
|
|
|
|
|
|
|
# score = previous score + new score |
468
|
|
|
|
|
|
|
|
469
|
|
|
|
|
|
|
if ( $ALGORITHM == 20 ) { |
470
|
|
|
|
|
|
|
if ( $self->config->DEBUG >= 4 ) { |
471
|
|
|
|
|
|
|
print " Score for label $label: " |
472
|
|
|
|
|
|
|
. ( |
473
|
|
|
|
|
|
|
$self->model->get_label_score( |
474
|
|
|
|
|
|
|
$label, $previous_label, $edge->features_all_labeller() |
475
|
|
|
|
|
|
|
) |
476
|
|
|
|
|
|
|
) . "\n"; |
477
|
|
|
|
|
|
|
} |
478
|
|
|
|
|
|
|
$result->{$label} = |
479
|
|
|
|
|
|
|
$self->model->get_label_score( |
480
|
|
|
|
|
|
|
$label, $previous_label, $edge->features_all_labeller() |
481
|
|
|
|
|
|
|
) |
482
|
|
|
|
|
|
|
; |
483
|
|
|
|
|
|
|
} elsif ( $ALGORITHM == 19 ) { |
484
|
|
|
|
|
|
|
if ( $self->config->DEBUG >= 4 ) { |
485
|
|
|
|
|
|
|
print " Score for label $label: $previous_label_score + " |
486
|
|
|
|
|
|
|
. ( |
487
|
|
|
|
|
|
|
$self->model->get_label_score( |
488
|
|
|
|
|
|
|
$label, $previous_label, $edge->features_all_labeller() |
489
|
|
|
|
|
|
|
) |
490
|
|
|
|
|
|
|
) . "\n"; |
491
|
|
|
|
|
|
|
} |
492
|
|
|
|
|
|
|
$result->{$label} = |
493
|
|
|
|
|
|
|
$previous_label_score |
494
|
|
|
|
|
|
|
* $self->model->get_label_score( |
495
|
|
|
|
|
|
|
$label, $previous_label, $edge->features |
496
|
|
|
|
|
|
|
) |
497
|
|
|
|
|
|
|
; |
498
|
|
|
|
|
|
|
} elsif ( $ALGORITHM == 21 ) { |
499
|
|
|
|
|
|
|
if ( $self->config->DEBUG >= 4 ) { |
500
|
|
|
|
|
|
|
print " Score for label $label: $previous_label_score + " |
501
|
|
|
|
|
|
|
. ( |
502
|
|
|
|
|
|
|
$self->model->get_label_score( |
503
|
|
|
|
|
|
|
$label, $previous_label, $edge->features_all_labeller() |
504
|
|
|
|
|
|
|
) |
505
|
|
|
|
|
|
|
) . "\n"; |
506
|
|
|
|
|
|
|
} |
507
|
|
|
|
|
|
|
$result->{$label} = |
508
|
|
|
|
|
|
|
$previous_label_score |
509
|
|
|
|
|
|
|
+ $self->model->get_label_score( |
510
|
|
|
|
|
|
|
$label, $previous_label, $edge->features_all_labeller() |
511
|
|
|
|
|
|
|
) |
512
|
|
|
|
|
|
|
; |
513
|
|
|
|
|
|
|
} elsif ( $ALGORITHM == 18 ) { |
514
|
|
|
|
|
|
|
$result->{$label} = |
515
|
|
|
|
|
|
|
$self->model->get_label_score( |
516
|
|
|
|
|
|
|
$label, $previous_label, $edge->features |
517
|
|
|
|
|
|
|
) |
518
|
|
|
|
|
|
|
; |
519
|
|
|
|
|
|
|
} else { |
520
|
|
|
|
|
|
|
if ( $self->config->DEBUG >= 4 ) { |
521
|
|
|
|
|
|
|
print " Score for label $label: $previous_label_score + " |
522
|
|
|
|
|
|
|
. ( |
523
|
|
|
|
|
|
|
$self->model->get_label_score( |
524
|
|
|
|
|
|
|
$label, $previous_label, $edge->features |
525
|
|
|
|
|
|
|
) |
526
|
|
|
|
|
|
|
) . "\n"; |
527
|
|
|
|
|
|
|
} |
528
|
|
|
|
|
|
|
$result->{$label} = |
529
|
|
|
|
|
|
|
$previous_label_score |
530
|
|
|
|
|
|
|
+ $self->model->get_label_score( |
531
|
|
|
|
|
|
|
$label, $previous_label, $edge->features |
532
|
|
|
|
|
|
|
) |
533
|
|
|
|
|
|
|
; |
534
|
|
|
|
|
|
|
} |
535
|
|
|
|
|
|
|
|
536
|
|
|
|
|
|
|
} # end foreach $label |
537
|
|
|
|
|
|
|
|
538
|
|
|
|
|
|
|
return $result; |
539
|
|
|
|
|
|
|
|
540
|
|
|
|
|
|
|
} else { # $ALGORITHM not in 8, 9, >16 |
541
|
|
|
|
|
|
|
|
542
|
|
|
|
|
|
|
my $emission_scores = |
543
|
|
|
|
|
|
|
$self->model->get_emission_scores( $edge->features ); |
544
|
|
|
|
|
|
|
|
545
|
|
|
|
|
|
|
my $transition_scores = {}; |
546
|
|
|
|
|
|
|
foreach my $possible_label ( keys %$emission_scores ) { |
547
|
|
|
|
|
|
|
$transition_scores->{$possible_label} = |
548
|
|
|
|
|
|
|
$self->model->get_transition_score( |
549
|
|
|
|
|
|
|
$possible_label, $previous_label |
550
|
|
|
|
|
|
|
); |
551
|
|
|
|
|
|
|
} |
552
|
|
|
|
|
|
|
|
553
|
|
|
|
|
|
|
my $possible_labels = $self->get_possible_labels_internal( |
554
|
|
|
|
|
|
|
$emission_scores, |
555
|
|
|
|
|
|
|
$transition_scores, |
556
|
|
|
|
|
|
|
$previous_label_score, |
557
|
|
|
|
|
|
|
); |
558
|
|
|
|
|
|
|
|
559
|
|
|
|
|
|
|
if ( scalar( keys %$possible_labels ) > 0 ) { |
560
|
|
|
|
|
|
|
return $possible_labels; |
561
|
|
|
|
|
|
|
} else { |
562
|
|
|
|
|
|
|
|
563
|
|
|
|
|
|
|
# no possible states generated -> backoff |
564
|
|
|
|
|
|
|
my %unigrams_copy = %{ $self->model->unigrams }; |
565
|
|
|
|
|
|
|
my $blind_scores = \%unigrams_copy; |
566
|
|
|
|
|
|
|
|
567
|
|
|
|
|
|
|
# TODO: smoothing (now a very stupid way is used |
568
|
|
|
|
|
|
|
# just to lower the scores below the unblind scores) |
569
|
|
|
|
|
|
|
foreach my $label ( keys %$blind_scores ) { |
570
|
|
|
|
|
|
|
$blind_scores->{$label} *= 0.01; |
571
|
|
|
|
|
|
|
} |
572
|
|
|
|
|
|
|
|
573
|
|
|
|
|
|
|
# fall back to unigram distribution for transitions |
574
|
|
|
|
|
|
|
# TODO: smoothing of bigram, unigram and uniform distros |
575
|
|
|
|
|
|
|
# for transitions |
576
|
|
|
|
|
|
|
# (this fallback should then become obsolete) |
577
|
|
|
|
|
|
|
$possible_labels = $self->get_possible_labels_internal( |
578
|
|
|
|
|
|
|
$emission_scores, |
579
|
|
|
|
|
|
|
$blind_scores, |
580
|
|
|
|
|
|
|
$previous_label_score, |
581
|
|
|
|
|
|
|
); |
582
|
|
|
|
|
|
|
|
583
|
|
|
|
|
|
|
if ( scalar( keys %$possible_labels ) > 0 ) { |
584
|
|
|
|
|
|
|
return $possible_labels; |
585
|
|
|
|
|
|
|
} else { |
586
|
|
|
|
|
|
|
warn "Based on the training data, no possible label was found" |
587
|
|
|
|
|
|
|
. " for an edge. This usually means that either" |
588
|
|
|
|
|
|
|
. " your training data are not big enough or that" |
589
|
|
|
|
|
|
|
. " the set of features you are using" |
590
|
|
|
|
|
|
|
. " is not well constructed - either it is too small" |
591
|
|
|
|
|
|
|
. " or it lacks features that would be general enough" |
592
|
|
|
|
|
|
|
. " to cover all possible sentences." |
593
|
|
|
|
|
|
|
. " Using blind emission probabilities instead.\n" |
594
|
|
|
|
|
|
|
. " get_possible_labels ($edge, $previous_label," |
595
|
|
|
|
|
|
|
. " $previous_label_score ) \n" |
596
|
|
|
|
|
|
|
. $edge->sentence->id |
597
|
|
|
|
|
|
|
. ': ' |
598
|
|
|
|
|
|
|
. $edge->parent->fields->[1] |
599
|
|
|
|
|
|
|
. " -> " |
600
|
|
|
|
|
|
|
. $edge->child->fields->[1] |
601
|
|
|
|
|
|
|
. "\n"; |
602
|
|
|
|
|
|
|
|
603
|
|
|
|
|
|
|
# TODO: these are more or less probabilities, which might |
604
|
|
|
|
|
|
|
# be unappropriate for some of the |
605
|
|
|
|
|
|
|
# algorithms -> recompute somehow; |
606
|
|
|
|
|
|
|
# also they do contain the SEQUENCE_BOUNDARY_LABEL prob |
607
|
|
|
|
|
|
|
|
608
|
|
|
|
|
|
|
$possible_labels = $self->get_possible_labels_internal( |
609
|
|
|
|
|
|
|
$blind_scores, |
610
|
|
|
|
|
|
|
$blind_scores, |
611
|
|
|
|
|
|
|
$previous_label_score, |
612
|
|
|
|
|
|
|
); |
613
|
|
|
|
|
|
|
|
614
|
|
|
|
|
|
|
if ( scalar( keys %$possible_labels ) > 0 ) { |
615
|
|
|
|
|
|
|
return $possible_labels; |
616
|
|
|
|
|
|
|
} else { |
617
|
|
|
|
|
|
|
warn "no possible labels generated, no fallback helped:" |
618
|
|
|
|
|
|
|
. " probably there is a bug in the code!" |
619
|
|
|
|
|
|
|
. " get_possible_labels ($edge, $previous_label," |
620
|
|
|
|
|
|
|
. " $previous_label_score ) " |
621
|
|
|
|
|
|
|
. $edge->parent->fields->[1] |
622
|
|
|
|
|
|
|
. " -> " |
623
|
|
|
|
|
|
|
. $edge->child->fields->[1] |
624
|
|
|
|
|
|
|
. "\n"; |
625
|
|
|
|
|
|
|
return {}; |
626
|
|
|
|
|
|
|
} # end no backoff helped |
627
|
|
|
|
|
|
|
} # end backoff by unigrams for emission and transition scores |
628
|
|
|
|
|
|
|
} # end backoff by unigrams for transition scores |
629
|
|
|
|
|
|
|
} # end $ALGORITHM not in 8,9 |
630
|
|
|
|
|
|
|
} |
631
|
|
|
|
|
|
|
|
632
|
|
|
|
|
|
|
sub get_possible_labels_internal { |
633
|
|
|
|
|
|
|
my ( $self, $emission_scores, $transition_scores, $last_state_score ) = @_; |
634
|
|
|
|
|
|
|
|
635
|
|
|
|
|
|
|
# $emission_scores are often not really probs but scores |
636
|
|
|
|
|
|
|
|
637
|
|
|
|
|
|
|
my $ALGORITHM = $self->config->labeller_algorithm; |
638
|
|
|
|
|
|
|
|
639
|
|
|
|
|
|
|
if ($ALGORITHM == 8 |
640
|
|
|
|
|
|
|
|| $ALGORITHM == 9 |
641
|
|
|
|
|
|
|
|| $ALGORITHM == 16 |
642
|
|
|
|
|
|
|
|| $ALGORITHM == 17 |
643
|
|
|
|
|
|
|
|| $ALGORITHM == 18 |
644
|
|
|
|
|
|
|
|| $ALGORITHM == 19 |
645
|
|
|
|
|
|
|
) |
646
|
|
|
|
|
|
|
{ |
647
|
|
|
|
|
|
|
|
648
|
|
|
|
|
|
|
# these algorithms have such a simple way of computing possible labels |
649
|
|
|
|
|
|
|
# they they do not need to have it split into two subroutines |
650
|
|
|
|
|
|
|
croak "Labeller->get_possible_labels_internal not implemented" |
651
|
|
|
|
|
|
|
. " for algorithm no $ALGORITHM!"; |
652
|
|
|
|
|
|
|
} |
653
|
|
|
|
|
|
|
|
654
|
|
|
|
|
|
|
my %possible_labels; |
655
|
|
|
|
|
|
|
foreach my $possible_label ( keys %$emission_scores ) { |
656
|
|
|
|
|
|
|
my $emission_score = $emission_scores->{$possible_label}; |
657
|
|
|
|
|
|
|
my $transition_score = $transition_scores->{$possible_label}; |
658
|
|
|
|
|
|
|
if ( !defined $transition_score ) { |
659
|
|
|
|
|
|
|
next; |
660
|
|
|
|
|
|
|
} |
661
|
|
|
|
|
|
|
|
662
|
|
|
|
|
|
|
my $possible_state_score; |
663
|
|
|
|
|
|
|
if ( $ALGORITHM == 2 ) { |
664
|
|
|
|
|
|
|
$possible_state_score |
665
|
|
|
|
|
|
|
= $last_state_score + $emission_score * $transition_score; |
666
|
|
|
|
|
|
|
} else { |
667
|
|
|
|
|
|
|
$possible_state_score |
668
|
|
|
|
|
|
|
= $last_state_score * $emission_score * $transition_score; |
669
|
|
|
|
|
|
|
} |
670
|
|
|
|
|
|
|
|
671
|
|
|
|
|
|
|
# if no state like that yet or better than current max, |
672
|
|
|
|
|
|
|
# use this new state |
673
|
|
|
|
|
|
|
if ($possible_state_score > 0 |
674
|
|
|
|
|
|
|
&& (!$possible_labels{$possible_label} |
675
|
|
|
|
|
|
|
|| $possible_labels{$possible_label}->{'score'} |
676
|
|
|
|
|
|
|
< $possible_state_score |
677
|
|
|
|
|
|
|
) |
678
|
|
|
|
|
|
|
) |
679
|
|
|
|
|
|
|
{ |
680
|
|
|
|
|
|
|
$possible_labels{$possible_label} = $possible_state_score; |
681
|
|
|
|
|
|
|
} |
682
|
|
|
|
|
|
|
|
683
|
|
|
|
|
|
|
# else we already have a state with the same key but higher score |
684
|
|
|
|
|
|
|
} # end foreach $possible_label |
685
|
|
|
|
|
|
|
|
686
|
|
|
|
|
|
|
return \%possible_labels; |
687
|
|
|
|
|
|
|
} |
688
|
|
|
|
|
|
|
|
689
|
|
|
|
|
|
|
1; |
690
|
|
|
|
|
|
|
|
691
|
|
|
|
|
|
|
__END__ |
692
|
|
|
|
|
|
|
|
693
|
|
|
|
|
|
|
|
694
|
|
|
|
|
|
|
=pod |
695
|
|
|
|
|
|
|
|
696
|
|
|
|
|
|
|
=for Pod::Coverage BUILD |
697
|
|
|
|
|
|
|
|
698
|
|
|
|
|
|
|
=encoding utf-8 |
699
|
|
|
|
|
|
|
|
700
|
|
|
|
|
|
|
=head1 NAME |
701
|
|
|
|
|
|
|
|
702
|
|
|
|
|
|
|
|
703
|
|
|
|
|
|
|
=head1 VERSION |
704
|
|
|
|
|
|
|
|
705
|
|
|
|
|
|
|
version 0.11949 |
706
|
|
|
|
|
|
|
Treex::Tool::Parser::MSTperl::Labeller - pure Perl implementation |
707
|
|
|
|
|
|
|
of a dependency tree labeller for the MST parser |
708
|
|
|
|
|
|
|
|
709
|
|
|
|
|
|
|
=head1 DESCRIPTION |
710
|
|
|
|
|
|
|
|
711
|
|
|
|
|
|
|
This is a Perl implementation of the labeller for MST Parser |
712
|
|
|
|
|
|
|
which is (most probably) described in |
713
|
|
|
|
|
|
|
McDonald, Ryan: Discriminative Learning And Spanning Tree Algorithms |
714
|
|
|
|
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For Dependency Parsing, 2006 (chapter 3.3.3 Two-Stage Labelling). |
715
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716
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|
For a dependency parse tree - presumably, but not necessarily, obtained using |
717
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the MST parser (L<Treex::Tool::Parser::MSTperl::Parser>), possibly |
718
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|
non-projective - assigns the most probable labels to the edges of the tree, |
719
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using the given model (L<Treex::Tool::Parser::MSTperl::ModelLabelling>). |
720
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721
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Assigning labels is implemented as sequence labelling, where the sequence to |
722
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|
be labelled is each sequence of edges between a parent node and its children. |
723
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First-order Markov factorization is used, but because we do the labelling as a |
724
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separate second stage to the parsing, many non-local features can be used, |
725
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exploiting the knowledge of the structure of the whole tree; also we go from |
726
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to root downwards and are therefore able to use the knowledge of labels |
727
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|
assigned to ancestor edges (especially the edge leading to the common parent |
728
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node). |
729
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730
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|
Each label is technically stored with the child node of the edge it belongs to, |
731
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|
so sometimes I will talk about a node label, which actually means the label |
732
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of the edge between the node and its parent. |
733
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|
734
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A variant of the Viterbi algorithm is used to find the best scoring sequence |
735
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|
of labels. However, instead of probabilities we use (real-valued) scores and |
736
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|
therefore instead of multiplication addition is used in Viterbi. |
737
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|
738
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|
For detail on the features and training see |
739
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L<Treex::Tool::Parser::MSTperl::TrainerLabelling>. |
740
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|
741
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|
742
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|
I have used several sources of information to implement it, especially: |
743
|
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744
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|
Kevin Gimpel and Shay Cohen: |
745
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|
Discriminative Online Algorithms for Sequence Labeling - A Comparative Study |
746
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(2007) |
747
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|
748
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|
And also parts of these: |
749
|
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750
|
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|
Junâichi Kazama and Kentaro Torisawa: |
751
|
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|
|
A New Perceptron Algorithm for Sequence Labeling with Non-local Features |
752
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|
(2007) |
753
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754
|
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|
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|
Wenliang Chen, Yujie Zhang, Hitoshi Isahara: |
755
|
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|
|
A Two-stage Parser for Multilingual Dependency Parsing |
756
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|
(2007) |
757
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758
|
|
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|
|
Binyamin Rozenfeld, Ronen Feldman, Moshe Fresko: |
759
|
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|
|
A Systematic Cross-Comparison of Sequence Classifiers |
760
|
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|
(2004?) |
761
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762
|
|
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|
|
=head1 FIELDS |
763
|
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|
764
|
|
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|
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|
|
=over 4 |
765
|
|
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|
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|
|
766
|
|
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|
|
=item config |
767
|
|
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|
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|
|
768
|
|
|
|
|
|
|
Instance of L<Treex::Tool::Parser::MSTperl::Config> containing settings to be |
769
|
|
|
|
|
|
|
used with labeller. |
770
|
|
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|
771
|
|
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|
|
|
|
Currently the settings most relevant to the Labeller are the following: |
772
|
|
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|
|
773
|
|
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|
|
=over 8 |
774
|
|
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|
|
775
|
|
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|
|
=item VITERBI_STATES_NUM_THRESHOLD |
776
|
|
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|
|
|
|
|
777
|
|
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|
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|
|
See L<Treex::Tool::Parser::MSTperl::Config/VITERBI_STATES_NUM_THRESHOLD>. |
778
|
|
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|
779
|
|
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|
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|
|
=item labeller_algorithm |
780
|
|
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|
781
|
|
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|
|
See L<Treex::Tool::Parser::MSTperl::Config/labeller_algorithm>. |
782
|
|
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783
|
|
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|
|
=item labelledFeaturesControl |
784
|
|
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|
785
|
|
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|
|
|
|
See L<Treex::Tool::Parser::MSTperl::Config/labelledFeaturesControl>. |
786
|
|
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|
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|
|
787
|
|
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|
|
=item SEQUENCE_BOUNDARY_LABEL |
788
|
|
|
|
|
|
|
|
789
|
|
|
|
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|
|
See L<Treex::Tool::Parser::MSTperl::Config/SEQUENCE_BOUNDARY_LABEL>. |
790
|
|
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|
791
|
|
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|
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|
|
=back |
792
|
|
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|
793
|
|
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|
|
|
|
=item model |
794
|
|
|
|
|
|
|
|
795
|
|
|
|
|
|
|
An instance of L<Treex::Tool::Parser::MSTperl::ModelLabelling> |
796
|
|
|
|
|
|
|
used to label the trees. It can be changed if needed (it is usually needed |
797
|
|
|
|
|
|
|
when training the labeller). |
798
|
|
|
|
|
|
|
|
799
|
|
|
|
|
|
|
=back |
800
|
|
|
|
|
|
|
|
801
|
|
|
|
|
|
|
=head1 METHODS |
802
|
|
|
|
|
|
|
|
803
|
|
|
|
|
|
|
=over 4 |
804
|
|
|
|
|
|
|
|
805
|
|
|
|
|
|
|
=item my $labeller = Treex::Tool::Parser::MSTperl::Labeller->new( |
806
|
|
|
|
|
|
|
config => $self->config); |
807
|
|
|
|
|
|
|
|
808
|
|
|
|
|
|
|
Creates an instance of the labeller using the given configuration, also |
809
|
|
|
|
|
|
|
initializing the model. |
810
|
|
|
|
|
|
|
|
811
|
|
|
|
|
|
|
=item $labeller->load_model('modelfile.lmodel'); |
812
|
|
|
|
|
|
|
|
813
|
|
|
|
|
|
|
=item $labeller->load_model_tsv('modelfile.tsv'); |
814
|
|
|
|
|
|
|
|
815
|
|
|
|
|
|
|
Loads a labelled model |
816
|
|
|
|
|
|
|
using L<Treex::Tool::Parser::MSTperl::ModelBase/load> |
817
|
|
|
|
|
|
|
or L<Treex::Tool::Parser::MSTperl::ModelBase/load_tsv>. |
818
|
|
|
|
|
|
|
|
819
|
|
|
|
|
|
|
A model has to be loaded or created in an other way |
820
|
|
|
|
|
|
|
before sentences can be labelled. |
821
|
|
|
|
|
|
|
|
822
|
|
|
|
|
|
|
=item $labeller->label_sentence($sentence); |
823
|
|
|
|
|
|
|
|
824
|
|
|
|
|
|
|
Labels a sentence (instance of L<Treex::Tool::Parser::MSTperl::Sentence>). It |
825
|
|
|
|
|
|
|
finds the best labels for the sentence and returns them as an array reference. |
826
|
|
|
|
|
|
|
|
827
|
|
|
|
|
|
|
The given sentence is left intact and any labelling information already |
828
|
|
|
|
|
|
|
contained in the sentence is disregarded. |
829
|
|
|
|
|
|
|
|
830
|
|
|
|
|
|
|
=item $labeller->label_sentence_internal($sentence); |
831
|
|
|
|
|
|
|
|
832
|
|
|
|
|
|
|
Does the actual labelling, returning a labelled instance of |
833
|
|
|
|
|
|
|
L<Treex::Tool::Parser::MSTperl::Sentence>. The C<label_sentence> sub is |
834
|
|
|
|
|
|
|
actually only a wrapper for this method which extracts the labels of the |
835
|
|
|
|
|
|
|
nodes and returns these. If you are only interested in getting the labels, |
836
|
|
|
|
|
|
|
use C<label_sentence>, but if it is handy for you to get a whole instance of |
837
|
|
|
|
|
|
|
L<Treex::Tool::Parser::MSTperl::Sentence> (which is labelled), use |
838
|
|
|
|
|
|
|
C<label_sentence_internal>. The subroutines are otherwise equivalent. |
839
|
|
|
|
|
|
|
|
840
|
|
|
|
|
|
|
The given sentence is left intact and any labelling information already |
841
|
|
|
|
|
|
|
contained in the sentence is disregarded. All other information from the |
842
|
|
|
|
|
|
|
given sentence is copied to the returned sentence, the sentence only differ |
843
|
|
|
|
|
|
|
in the labels assigned. |
844
|
|
|
|
|
|
|
|
845
|
|
|
|
|
|
|
=item $labeller->label_subtree($parent); |
846
|
|
|
|
|
|
|
|
847
|
|
|
|
|
|
|
Assign labels to edges going from the $parent node to its children |
848
|
|
|
|
|
|
|
(and recurse on the children). |
849
|
|
|
|
|
|
|
Directly modifies the sentence |
850
|
|
|
|
|
|
|
(or more precisely: the nodes within the sentence). |
851
|
|
|
|
|
|
|
|
852
|
|
|
|
|
|
|
=item $labeller->label_edge($edge, $states); |
853
|
|
|
|
|
|
|
|
854
|
|
|
|
|
|
|
Used as an internal part of label_subtree |
855
|
|
|
|
|
|
|
to get all probable labels for an edge $edge |
856
|
|
|
|
|
|
|
i.e. make one step of the Viterbi algorithm. |
857
|
|
|
|
|
|
|
The $states is a hash reference of all currently active Viterbi states. |
858
|
|
|
|
|
|
|
|
859
|
|
|
|
|
|
|
=item $labeller->prune($states); |
860
|
|
|
|
|
|
|
|
861
|
|
|
|
|
|
|
Prune the states (passed as a hash ref), currently does n-best pruning |
862
|
|
|
|
|
|
|
with n = C<config->VITERBI_STATES_NUM_THRESHOLD>, keeping always n best scoring |
863
|
|
|
|
|
|
|
states at maximum (all states if there are less than n). Is called after |
864
|
|
|
|
|
|
|
each Viterbi step, i.e. at the end of each call of C<label_edge>. |
865
|
|
|
|
|
|
|
Returns the new pruned states (does not modify its input). |
866
|
|
|
|
|
|
|
|
867
|
|
|
|
|
|
|
=item $labeller->get_possible_labels($edge, $previous_label, |
868
|
|
|
|
|
|
|
$previous_label_score); |
869
|
|
|
|
|
|
|
|
870
|
|
|
|
|
|
|
Computes possible labels for an edge, using info about the emission scores, |
871
|
|
|
|
|
|
|
transition scores and last state's score. (Because of the first order Markov |
872
|
|
|
|
|
|
|
factorization used, the states correspond to labels assigned to the edges they |
873
|
|
|
|
|
|
|
corresond to.) |
874
|
|
|
|
|
|
|
|
875
|
|
|
|
|
|
|
=item $labeller->get_possible_labels_internal |
876
|
|
|
|
|
|
|
($emission_scores, $transition_scores, $last_state_score); |
877
|
|
|
|
|
|
|
|
878
|
|
|
|
|
|
|
Does the actual generation of possible labels for an edge, where the emission |
879
|
|
|
|
|
|
|
and transition scores are already computed for this particular edge. |
880
|
|
|
|
|
|
|
|
881
|
|
|
|
|
|
|
=back |
882
|
|
|
|
|
|
|
|
883
|
|
|
|
|
|
|
=head1 AUTHORS |
884
|
|
|
|
|
|
|
|
885
|
|
|
|
|
|
|
Rudolf Rosa <rosa@ufal.mff.cuni.cz> |
886
|
|
|
|
|
|
|
|
887
|
|
|
|
|
|
|
=head1 COPYRIGHT AND LICENSE |
888
|
|
|
|
|
|
|
|
889
|
|
|
|
|
|
|
Copyright © 2011 by Institute of Formal and Applied Linguistics, Charles |
890
|
|
|
|
|
|
|
University in Prague |
891
|
|
|
|
|
|
|
|
892
|
|
|
|
|
|
|
This module is free software; you can redistribute it and/or modify it under |
893
|
|
|
|
|
|
|
the same terms as Perl itself. |