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/* |
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* LibXDiff by Davide Libenzi ( File Differential Library ) |
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* Copyright (C) 2003 Davide Libenzi |
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* |
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* This library is free software; you can redistribute it and/or |
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* modify it under the terms of the GNU Lesser General Public |
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* License as published by the Free Software Foundation; either |
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* version 2.1 of the License, or (at your option) any later version. |
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* |
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* This library is distributed in the hope that it will be useful, |
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* but WITHOUT ANY WARRANTY; without even the implied warranty of |
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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* Lesser General Public License for more details. |
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* |
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* You should have received a copy of the GNU Lesser General Public |
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* License along with this library; if not, see |
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* . |
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* |
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* Davide Libenzi |
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* |
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*/ |
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#include "xinclude.h" |
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25
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26
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#define XDL_KPDIS_RUN 4 |
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#define XDL_MAX_EQLIMIT 1024 |
28
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#define XDL_SIMSCAN_WINDOW 100 |
29
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#define XDL_GUESS_NLINES1 256 |
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#define XDL_GUESS_NLINES2 20 |
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32
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33
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typedef struct s_xdlclass { |
34
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struct s_xdlclass *next; |
35
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unsigned long ha; |
36
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char const *line; |
37
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long size; |
38
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long idx; |
39
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long len1, len2; |
40
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} xdlclass_t; |
41
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42
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typedef struct s_xdlclassifier { |
43
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unsigned int hbits; |
44
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long hsize; |
45
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xdlclass_t **rchash; |
46
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chastore_t ncha; |
47
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xdlclass_t **rcrecs; |
48
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long alloc; |
49
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long count; |
50
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long flags; |
51
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} xdlclassifier_t; |
52
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53
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54
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55
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56
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static int xdl_init_classifier(xdlclassifier_t *cf, long size, long flags); |
57
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static void xdl_free_classifier(xdlclassifier_t *cf); |
58
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static int xdl_classify_record(unsigned int pass, xdlclassifier_t *cf, xrecord_t **rhash, |
59
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unsigned int hbits, xrecord_t *rec); |
60
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static int xdl_prepare_ctx(unsigned int pass, mmfile_t *mf, long narec, xpparam_t const *xpp, |
61
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xdlclassifier_t *cf, xdfile_t *xdf); |
62
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static void xdl_free_ctx(xdfile_t *xdf); |
63
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static int xdl_clean_mmatch(char const *dis, long i, long s, long e); |
64
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static int xdl_cleanup_records(xdlclassifier_t *cf, xdfile_t *xdf1, xdfile_t *xdf2); |
65
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static int xdl_trim_ends(xdfile_t *xdf1, xdfile_t *xdf2); |
66
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static int xdl_optimize_ctxs(xdlclassifier_t *cf, xdfile_t *xdf1, xdfile_t *xdf2); |
67
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68
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69
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70
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71
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73
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static int xdl_init_classifier(xdlclassifier_t *cf, long size, long flags) { |
72
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73
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cf->flags = flags; |
73
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74
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73
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cf->hbits = xdl_hashbits((unsigned int) size); |
75
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73
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cf->hsize = 1 << cf->hbits; |
76
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77
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73
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50
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if (xdl_cha_init(&cf->ncha, sizeof(xdlclass_t), size / 4 + 1) < 0) { |
78
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79
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0
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return -1; |
80
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} |
81
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73
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50
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if (!(cf->rchash = (xdlclass_t **) xdl_malloc(cf->hsize * sizeof(xdlclass_t *)))) { |
82
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83
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0
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xdl_cha_free(&cf->ncha); |
84
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0
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return -1; |
85
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} |
86
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73
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memset(cf->rchash, 0, cf->hsize * sizeof(xdlclass_t *)); |
87
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88
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73
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cf->alloc = size; |
89
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73
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50
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if (!(cf->rcrecs = (xdlclass_t **) xdl_malloc(cf->alloc * sizeof(xdlclass_t *)))) { |
90
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91
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0
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xdl_free(cf->rchash); |
92
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0
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xdl_cha_free(&cf->ncha); |
93
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0
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return -1; |
94
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} |
95
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96
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73
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cf->count = 0; |
97
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98
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73
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return 0; |
99
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} |
100
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101
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102
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73
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static void xdl_free_classifier(xdlclassifier_t *cf) { |
103
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104
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73
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xdl_free(cf->rcrecs); |
105
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73
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xdl_free(cf->rchash); |
106
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73
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xdl_cha_free(&cf->ncha); |
107
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73
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} |
108
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109
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110
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163
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static int xdl_classify_record(unsigned int pass, xdlclassifier_t *cf, xrecord_t **rhash, |
111
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unsigned int hbits, xrecord_t *rec) { |
112
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long hi; |
113
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char const *line; |
114
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xdlclass_t *rcrec; |
115
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xdlclass_t **rcrecs; |
116
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117
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163
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line = rec->ptr; |
118
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163
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hi = (long) XDL_HASHLONG(rec->ha, cf->hbits); |
119
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176
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100
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for (rcrec = cf->rchash[hi]; rcrec; rcrec = rcrec->next) |
120
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69
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if (rcrec->ha == rec->ha && |
121
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30
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xdl_recmatch(rcrec->line, rcrec->size, |
122
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|
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rec->ptr, rec->size, cf->flags)) |
123
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26
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break; |
124
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125
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163
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100
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if (!rcrec) { |
126
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137
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50
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if (!(rcrec = xdl_cha_alloc(&cf->ncha))) { |
127
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|
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128
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0
|
|
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return -1; |
129
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|
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|
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} |
130
|
137
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|
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rcrec->idx = cf->count++; |
131
|
137
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50
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|
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if (cf->count > cf->alloc) { |
132
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0
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|
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cf->alloc *= 2; |
133
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0
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0
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|
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if (!(rcrecs = (xdlclass_t **) xdl_realloc(cf->rcrecs, cf->alloc * sizeof(xdlclass_t *)))) { |
134
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|
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|
|
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135
|
0
|
|
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|
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return -1; |
136
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|
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|
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} |
137
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0
|
|
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cf->rcrecs = rcrecs; |
138
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|
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|
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} |
139
|
137
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|
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|
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|
cf->rcrecs[rcrec->idx] = rcrec; |
140
|
137
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|
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rcrec->line = line; |
141
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137
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|
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|
rcrec->size = rec->size; |
142
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137
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|
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rcrec->ha = rec->ha; |
143
|
137
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|
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|
rcrec->len1 = rcrec->len2 = 0; |
144
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137
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|
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rcrec->next = cf->rchash[hi]; |
145
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137
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|
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cf->rchash[hi] = rcrec; |
146
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|
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} |
147
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|
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|
|
|
|
|
148
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163
|
100
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|
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(pass == 1) ? rcrec->len1++ : rcrec->len2++; |
149
|
|
|
|
|
|
|
|
150
|
163
|
|
|
|
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|
rec->ha = (unsigned long) rcrec->idx; |
151
|
|
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|
|
|
|
|
152
|
163
|
|
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|
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hi = (long) XDL_HASHLONG(rec->ha, hbits); |
153
|
163
|
|
|
|
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rec->next = rhash[hi]; |
154
|
163
|
|
|
|
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|
rhash[hi] = rec; |
155
|
|
|
|
|
|
|
|
156
|
163
|
|
|
|
|
|
return 0; |
157
|
|
|
|
|
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} |
158
|
|
|
|
|
|
|
|
159
|
|
|
|
|
|
|
|
160
|
146
|
|
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static int xdl_prepare_ctx(unsigned int pass, mmfile_t *mf, long narec, xpparam_t const *xpp, |
161
|
|
|
|
|
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xdlclassifier_t *cf, xdfile_t *xdf) { |
162
|
|
|
|
|
|
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unsigned int hbits; |
163
|
|
|
|
|
|
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long nrec, hsize, bsize; |
164
|
|
|
|
|
|
|
unsigned long hav; |
165
|
|
|
|
|
|
|
char const *blk, *cur, *top, *prev; |
166
|
|
|
|
|
|
|
xrecord_t *crec; |
167
|
|
|
|
|
|
|
xrecord_t **recs, **rrecs; |
168
|
|
|
|
|
|
|
xrecord_t **rhash; |
169
|
|
|
|
|
|
|
unsigned long *ha; |
170
|
|
|
|
|
|
|
char *rchg; |
171
|
|
|
|
|
|
|
long *rindex; |
172
|
|
|
|
|
|
|
|
173
|
146
|
|
|
|
|
|
ha = NULL; |
174
|
146
|
|
|
|
|
|
rindex = NULL; |
175
|
146
|
|
|
|
|
|
rchg = NULL; |
176
|
146
|
|
|
|
|
|
rhash = NULL; |
177
|
146
|
|
|
|
|
|
recs = NULL; |
178
|
|
|
|
|
|
|
|
179
|
146
|
50
|
|
|
|
|
if (xdl_cha_init(&xdf->rcha, sizeof(xrecord_t), narec / 4 + 1) < 0) |
180
|
0
|
|
|
|
|
|
goto abort; |
181
|
146
|
50
|
|
|
|
|
if (!(recs = (xrecord_t **) xdl_malloc(narec * sizeof(xrecord_t *)))) |
182
|
0
|
|
|
|
|
|
goto abort; |
183
|
|
|
|
|
|
|
|
184
|
146
|
|
|
|
|
|
hbits = xdl_hashbits((unsigned int) narec); |
185
|
146
|
|
|
|
|
|
hsize = 1 << hbits; |
186
|
146
|
50
|
|
|
|
|
if (!(rhash = (xrecord_t **) xdl_malloc(hsize * sizeof(xrecord_t *)))) |
187
|
0
|
|
|
|
|
|
goto abort; |
188
|
146
|
|
|
|
|
|
memset(rhash, 0, hsize * sizeof(xrecord_t *)); |
189
|
|
|
|
|
|
|
|
190
|
146
|
|
|
|
|
|
nrec = 0; |
191
|
146
|
50
|
|
|
|
|
if ((cur = blk = xdl_mmfile_first(mf, &bsize)) != NULL) { |
192
|
309
|
100
|
|
|
|
|
for (top = blk + bsize; cur < top; ) { |
193
|
163
|
|
|
|
|
|
prev = cur; |
194
|
163
|
|
|
|
|
|
hav = xdl_hash_record(&cur, top, xpp->flags); |
195
|
163
|
50
|
|
|
|
|
if (nrec >= narec) { |
196
|
0
|
|
|
|
|
|
narec *= 2; |
197
|
0
|
0
|
|
|
|
|
if (!(rrecs = (xrecord_t **) xdl_realloc(recs, narec * sizeof(xrecord_t *)))) |
198
|
0
|
|
|
|
|
|
goto abort; |
199
|
0
|
|
|
|
|
|
recs = rrecs; |
200
|
|
|
|
|
|
|
} |
201
|
163
|
50
|
|
|
|
|
if (!(crec = xdl_cha_alloc(&xdf->rcha))) |
202
|
0
|
|
|
|
|
|
goto abort; |
203
|
163
|
|
|
|
|
|
crec->ptr = prev; |
204
|
163
|
|
|
|
|
|
crec->size = (long) (cur - prev); |
205
|
163
|
|
|
|
|
|
crec->ha = hav; |
206
|
163
|
|
|
|
|
|
recs[nrec++] = crec; |
207
|
163
|
50
|
|
|
|
|
if (xdl_classify_record(pass, cf, rhash, hbits, crec) < 0) |
208
|
0
|
|
|
|
|
|
goto abort; |
209
|
|
|
|
|
|
|
} |
210
|
|
|
|
|
|
|
} |
211
|
|
|
|
|
|
|
|
212
|
146
|
50
|
|
|
|
|
if (!(rchg = (char *) xdl_malloc((nrec + 2) * sizeof(char)))) |
213
|
0
|
|
|
|
|
|
goto abort; |
214
|
146
|
|
|
|
|
|
memset(rchg, 0, (nrec + 2) * sizeof(char)); |
215
|
|
|
|
|
|
|
|
216
|
146
|
50
|
|
|
|
|
if ((XDF_DIFF_ALG(xpp->flags) != XDF_PATIENCE_DIFF) && |
|
|
50
|
|
|
|
|
|
217
|
146
|
|
|
|
|
|
(XDF_DIFF_ALG(xpp->flags) != XDF_HISTOGRAM_DIFF)) { |
218
|
146
|
50
|
|
|
|
|
if (!(rindex = xdl_malloc((nrec + 1) * sizeof(*rindex)))) |
219
|
0
|
|
|
|
|
|
goto abort; |
220
|
146
|
50
|
|
|
|
|
if (!(ha = xdl_malloc((nrec + 1) * sizeof(*ha)))) |
221
|
0
|
|
|
|
|
|
goto abort; |
222
|
|
|
|
|
|
|
} |
223
|
|
|
|
|
|
|
|
224
|
146
|
|
|
|
|
|
xdf->nrec = nrec; |
225
|
146
|
|
|
|
|
|
xdf->recs = recs; |
226
|
146
|
|
|
|
|
|
xdf->hbits = hbits; |
227
|
146
|
|
|
|
|
|
xdf->rhash = rhash; |
228
|
146
|
|
|
|
|
|
xdf->rchg = rchg + 1; |
229
|
146
|
|
|
|
|
|
xdf->rindex = rindex; |
230
|
146
|
|
|
|
|
|
xdf->nreff = 0; |
231
|
146
|
|
|
|
|
|
xdf->ha = ha; |
232
|
146
|
|
|
|
|
|
xdf->dstart = 0; |
233
|
146
|
|
|
|
|
|
xdf->dend = nrec - 1; |
234
|
|
|
|
|
|
|
|
235
|
146
|
|
|
|
|
|
return 0; |
236
|
|
|
|
|
|
|
|
237
|
|
|
|
|
|
|
abort: |
238
|
0
|
|
|
|
|
|
xdl_free(ha); |
239
|
0
|
|
|
|
|
|
xdl_free(rindex); |
240
|
0
|
|
|
|
|
|
xdl_free(rchg); |
241
|
0
|
|
|
|
|
|
xdl_free(rhash); |
242
|
0
|
|
|
|
|
|
xdl_free(recs); |
243
|
0
|
|
|
|
|
|
xdl_cha_free(&xdf->rcha); |
244
|
146
|
|
|
|
|
|
return -1; |
245
|
|
|
|
|
|
|
} |
246
|
|
|
|
|
|
|
|
247
|
|
|
|
|
|
|
|
248
|
146
|
|
|
|
|
|
static void xdl_free_ctx(xdfile_t *xdf) { |
249
|
|
|
|
|
|
|
|
250
|
146
|
|
|
|
|
|
xdl_free(xdf->rhash); |
251
|
146
|
|
|
|
|
|
xdl_free(xdf->rindex); |
252
|
146
|
|
|
|
|
|
xdl_free(xdf->rchg - 1); |
253
|
146
|
|
|
|
|
|
xdl_free(xdf->ha); |
254
|
146
|
|
|
|
|
|
xdl_free(xdf->recs); |
255
|
146
|
|
|
|
|
|
xdl_cha_free(&xdf->rcha); |
256
|
146
|
|
|
|
|
|
} |
257
|
|
|
|
|
|
|
|
258
|
|
|
|
|
|
|
|
259
|
73
|
|
|
|
|
|
int xdl_prepare_env(mmfile_t *mf1, mmfile_t *mf2, xpparam_t const *xpp, |
260
|
|
|
|
|
|
|
xdfenv_t *xe) { |
261
|
|
|
|
|
|
|
long enl1, enl2, sample; |
262
|
|
|
|
|
|
|
xdlclassifier_t cf; |
263
|
|
|
|
|
|
|
|
264
|
73
|
|
|
|
|
|
memset(&cf, 0, sizeof(cf)); |
265
|
|
|
|
|
|
|
|
266
|
|
|
|
|
|
|
/* |
267
|
|
|
|
|
|
|
* For histogram diff, we can afford a smaller sample size and |
268
|
|
|
|
|
|
|
* thus a poorer estimate of the number of lines, as the hash |
269
|
|
|
|
|
|
|
* table (rhash) won't be filled up/grown. The number of lines |
270
|
|
|
|
|
|
|
* (nrecs) will be updated correctly anyway by |
271
|
|
|
|
|
|
|
* xdl_prepare_ctx(). |
272
|
|
|
|
|
|
|
*/ |
273
|
73
|
50
|
|
|
|
|
sample = (XDF_DIFF_ALG(xpp->flags) == XDF_HISTOGRAM_DIFF |
274
|
|
|
|
|
|
|
? XDL_GUESS_NLINES2 : XDL_GUESS_NLINES1); |
275
|
|
|
|
|
|
|
|
276
|
73
|
|
|
|
|
|
enl1 = xdl_guess_lines(mf1, sample) + 1; |
277
|
73
|
|
|
|
|
|
enl2 = xdl_guess_lines(mf2, sample) + 1; |
278
|
|
|
|
|
|
|
|
279
|
73
|
50
|
|
|
|
|
if (xdl_init_classifier(&cf, enl1 + enl2 + 1, xpp->flags) < 0) |
280
|
0
|
|
|
|
|
|
return -1; |
281
|
|
|
|
|
|
|
|
282
|
73
|
50
|
|
|
|
|
if (xdl_prepare_ctx(1, mf1, enl1, xpp, &cf, &xe->xdf1) < 0) { |
283
|
|
|
|
|
|
|
|
284
|
0
|
|
|
|
|
|
xdl_free_classifier(&cf); |
285
|
0
|
|
|
|
|
|
return -1; |
286
|
|
|
|
|
|
|
} |
287
|
73
|
50
|
|
|
|
|
if (xdl_prepare_ctx(2, mf2, enl2, xpp, &cf, &xe->xdf2) < 0) { |
288
|
|
|
|
|
|
|
|
289
|
0
|
|
|
|
|
|
xdl_free_ctx(&xe->xdf1); |
290
|
0
|
|
|
|
|
|
xdl_free_classifier(&cf); |
291
|
0
|
|
|
|
|
|
return -1; |
292
|
|
|
|
|
|
|
} |
293
|
|
|
|
|
|
|
|
294
|
73
|
50
|
|
|
|
|
if ((XDF_DIFF_ALG(xpp->flags) != XDF_PATIENCE_DIFF) && |
|
|
50
|
|
|
|
|
|
295
|
73
|
50
|
|
|
|
|
(XDF_DIFF_ALG(xpp->flags) != XDF_HISTOGRAM_DIFF) && |
296
|
73
|
|
|
|
|
|
xdl_optimize_ctxs(&cf, &xe->xdf1, &xe->xdf2) < 0) { |
297
|
|
|
|
|
|
|
|
298
|
0
|
|
|
|
|
|
xdl_free_ctx(&xe->xdf2); |
299
|
0
|
|
|
|
|
|
xdl_free_ctx(&xe->xdf1); |
300
|
0
|
|
|
|
|
|
xdl_free_classifier(&cf); |
301
|
0
|
|
|
|
|
|
return -1; |
302
|
|
|
|
|
|
|
} |
303
|
|
|
|
|
|
|
|
304
|
73
|
|
|
|
|
|
xdl_free_classifier(&cf); |
305
|
|
|
|
|
|
|
|
306
|
73
|
|
|
|
|
|
return 0; |
307
|
|
|
|
|
|
|
} |
308
|
|
|
|
|
|
|
|
309
|
|
|
|
|
|
|
|
310
|
73
|
|
|
|
|
|
void xdl_free_env(xdfenv_t *xe) { |
311
|
|
|
|
|
|
|
|
312
|
73
|
|
|
|
|
|
xdl_free_ctx(&xe->xdf2); |
313
|
73
|
|
|
|
|
|
xdl_free_ctx(&xe->xdf1); |
314
|
73
|
|
|
|
|
|
} |
315
|
|
|
|
|
|
|
|
316
|
|
|
|
|
|
|
|
317
|
3
|
|
|
|
|
|
static int xdl_clean_mmatch(char const *dis, long i, long s, long e) { |
318
|
|
|
|
|
|
|
long r, rdis0, rpdis0, rdis1, rpdis1; |
319
|
|
|
|
|
|
|
|
320
|
|
|
|
|
|
|
/* |
321
|
|
|
|
|
|
|
* Limits the window the is examined during the similar-lines |
322
|
|
|
|
|
|
|
* scan. The loops below stops when dis[i - r] == 1 (line that |
323
|
|
|
|
|
|
|
* has no match), but there are corner cases where the loop |
324
|
|
|
|
|
|
|
* proceed all the way to the extremities by causing huge |
325
|
|
|
|
|
|
|
* performance penalties in case of big files. |
326
|
|
|
|
|
|
|
*/ |
327
|
3
|
50
|
|
|
|
|
if (i - s > XDL_SIMSCAN_WINDOW) |
328
|
0
|
|
|
|
|
|
s = i - XDL_SIMSCAN_WINDOW; |
329
|
3
|
50
|
|
|
|
|
if (e - i > XDL_SIMSCAN_WINDOW) |
330
|
0
|
|
|
|
|
|
e = i + XDL_SIMSCAN_WINDOW; |
331
|
|
|
|
|
|
|
|
332
|
|
|
|
|
|
|
/* |
333
|
|
|
|
|
|
|
* Scans the lines before 'i' to find a run of lines that either |
334
|
|
|
|
|
|
|
* have no match (dis[j] == 0) or have multiple matches (dis[j] > 1). |
335
|
|
|
|
|
|
|
* Note that we always call this function with dis[i] > 1, so the |
336
|
|
|
|
|
|
|
* current line (i) is already a multimatch line. |
337
|
|
|
|
|
|
|
*/ |
338
|
7
|
100
|
|
|
|
|
for (r = 1, rdis0 = 0, rpdis0 = 1; (i - r) >= s; r++) { |
339
|
4
|
100
|
|
|
|
|
if (!dis[i - r]) |
340
|
3
|
|
|
|
|
|
rdis0++; |
341
|
1
|
50
|
|
|
|
|
else if (dis[i - r] == 2) |
342
|
1
|
|
|
|
|
|
rpdis0++; |
343
|
|
|
|
|
|
|
else |
344
|
0
|
|
|
|
|
|
break; |
345
|
|
|
|
|
|
|
} |
346
|
|
|
|
|
|
|
/* |
347
|
|
|
|
|
|
|
* If the run before the line 'i' found only multimatch lines, we |
348
|
|
|
|
|
|
|
* return 0 and hence we don't make the current line (i) discarded. |
349
|
|
|
|
|
|
|
* We want to discard multimatch lines only when they appear in the |
350
|
|
|
|
|
|
|
* middle of runs with nomatch lines (dis[j] == 0). |
351
|
|
|
|
|
|
|
*/ |
352
|
3
|
100
|
|
|
|
|
if (rdis0 == 0) |
353
|
1
|
|
|
|
|
|
return 0; |
354
|
6
|
100
|
|
|
|
|
for (r = 1, rdis1 = 0, rpdis1 = 1; (i + r) <= e; r++) { |
355
|
4
|
100
|
|
|
|
|
if (!dis[i + r]) |
356
|
3
|
|
|
|
|
|
rdis1++; |
357
|
1
|
50
|
|
|
|
|
else if (dis[i + r] == 2) |
358
|
1
|
|
|
|
|
|
rpdis1++; |
359
|
|
|
|
|
|
|
else |
360
|
0
|
|
|
|
|
|
break; |
361
|
|
|
|
|
|
|
} |
362
|
|
|
|
|
|
|
/* |
363
|
|
|
|
|
|
|
* If the run after the line 'i' found only multimatch lines, we |
364
|
|
|
|
|
|
|
* return 0 and hence we don't make the current line (i) discarded. |
365
|
|
|
|
|
|
|
*/ |
366
|
2
|
50
|
|
|
|
|
if (rdis1 == 0) |
367
|
0
|
|
|
|
|
|
return 0; |
368
|
2
|
|
|
|
|
|
rdis1 += rdis0; |
369
|
2
|
|
|
|
|
|
rpdis1 += rpdis0; |
370
|
|
|
|
|
|
|
|
371
|
2
|
|
|
|
|
|
return rpdis1 * XDL_KPDIS_RUN < (rpdis1 + rdis1); |
372
|
|
|
|
|
|
|
} |
373
|
|
|
|
|
|
|
|
374
|
|
|
|
|
|
|
|
375
|
|
|
|
|
|
|
/* |
376
|
|
|
|
|
|
|
* Try to reduce the problem complexity, discard records that have no |
377
|
|
|
|
|
|
|
* matches on the other file. Also, lines that have multiple matches |
378
|
|
|
|
|
|
|
* might be potentially discarded if they happear in a run of discardable. |
379
|
|
|
|
|
|
|
*/ |
380
|
73
|
|
|
|
|
|
static int xdl_cleanup_records(xdlclassifier_t *cf, xdfile_t *xdf1, xdfile_t *xdf2) { |
381
|
|
|
|
|
|
|
long i, nm, nreff, mlim; |
382
|
|
|
|
|
|
|
xrecord_t **recs; |
383
|
|
|
|
|
|
|
xdlclass_t *rcrec; |
384
|
|
|
|
|
|
|
char *dis, *dis1, *dis2; |
385
|
|
|
|
|
|
|
|
386
|
73
|
50
|
|
|
|
|
if (!(dis = (char *) xdl_malloc(xdf1->nrec + xdf2->nrec + 2))) { |
387
|
|
|
|
|
|
|
|
388
|
0
|
|
|
|
|
|
return -1; |
389
|
|
|
|
|
|
|
} |
390
|
73
|
|
|
|
|
|
memset(dis, 0, xdf1->nrec + xdf2->nrec + 2); |
391
|
73
|
|
|
|
|
|
dis1 = dis; |
392
|
73
|
|
|
|
|
|
dis2 = dis1 + xdf1->nrec + 1; |
393
|
|
|
|
|
|
|
|
394
|
73
|
50
|
|
|
|
|
if ((mlim = xdl_bogosqrt(xdf1->nrec)) > XDL_MAX_EQLIMIT) |
395
|
0
|
|
|
|
|
|
mlim = XDL_MAX_EQLIMIT; |
396
|
124
|
100
|
|
|
|
|
for (i = xdf1->dstart, recs = &xdf1->recs[xdf1->dstart]; i <= xdf1->dend; i++, recs++) { |
397
|
51
|
|
|
|
|
|
rcrec = cf->rcrecs[(*recs)->ha]; |
398
|
51
|
50
|
|
|
|
|
nm = rcrec ? rcrec->len2 : 0; |
399
|
51
|
100
|
|
|
|
|
dis1[i] = (nm == 0) ? 0: (nm >= mlim) ? 2: 1; |
|
|
100
|
|
|
|
|
|
400
|
|
|
|
|
|
|
} |
401
|
|
|
|
|
|
|
|
402
|
73
|
50
|
|
|
|
|
if ((mlim = xdl_bogosqrt(xdf2->nrec)) > XDL_MAX_EQLIMIT) |
403
|
0
|
|
|
|
|
|
mlim = XDL_MAX_EQLIMIT; |
404
|
155
|
100
|
|
|
|
|
for (i = xdf2->dstart, recs = &xdf2->recs[xdf2->dstart]; i <= xdf2->dend; i++, recs++) { |
405
|
82
|
|
|
|
|
|
rcrec = cf->rcrecs[(*recs)->ha]; |
406
|
82
|
50
|
|
|
|
|
nm = rcrec ? rcrec->len1 : 0; |
407
|
82
|
100
|
|
|
|
|
dis2[i] = (nm == 0) ? 0: (nm >= mlim) ? 2: 1; |
|
|
50
|
|
|
|
|
|
408
|
|
|
|
|
|
|
} |
409
|
|
|
|
|
|
|
|
410
|
124
|
100
|
|
|
|
|
for (nreff = 0, i = xdf1->dstart, recs = &xdf1->recs[xdf1->dstart]; |
411
|
51
|
|
|
|
|
|
i <= xdf1->dend; i++, recs++) { |
412
|
51
|
100
|
|
|
|
|
if (dis1[i] == 1 || |
|
|
100
|
|
|
|
|
|
413
|
1
|
50
|
|
|
|
|
(dis1[i] == 2 && !xdl_clean_mmatch(dis1, i, xdf1->dstart, xdf1->dend))) { |
414
|
6
|
|
|
|
|
|
xdf1->rindex[nreff] = i; |
415
|
6
|
|
|
|
|
|
xdf1->ha[nreff] = (*recs)->ha; |
416
|
6
|
|
|
|
|
|
nreff++; |
417
|
|
|
|
|
|
|
} else |
418
|
45
|
|
|
|
|
|
xdf1->rchg[i] = 1; |
419
|
|
|
|
|
|
|
} |
420
|
73
|
|
|
|
|
|
xdf1->nreff = nreff; |
421
|
|
|
|
|
|
|
|
422
|
155
|
100
|
|
|
|
|
for (nreff = 0, i = xdf2->dstart, recs = &xdf2->recs[xdf2->dstart]; |
423
|
82
|
|
|
|
|
|
i <= xdf2->dend; i++, recs++) { |
424
|
82
|
50
|
|
|
|
|
if (dis2[i] == 1 || |
|
|
100
|
|
|
|
|
|
425
|
2
|
50
|
|
|
|
|
(dis2[i] == 2 && !xdl_clean_mmatch(dis2, i, xdf2->dstart, xdf2->dend))) { |
426
|
2
|
|
|
|
|
|
xdf2->rindex[nreff] = i; |
427
|
2
|
|
|
|
|
|
xdf2->ha[nreff] = (*recs)->ha; |
428
|
2
|
|
|
|
|
|
nreff++; |
429
|
|
|
|
|
|
|
} else |
430
|
80
|
|
|
|
|
|
xdf2->rchg[i] = 1; |
431
|
|
|
|
|
|
|
} |
432
|
73
|
|
|
|
|
|
xdf2->nreff = nreff; |
433
|
|
|
|
|
|
|
|
434
|
73
|
|
|
|
|
|
xdl_free(dis); |
435
|
|
|
|
|
|
|
|
436
|
73
|
|
|
|
|
|
return 0; |
437
|
|
|
|
|
|
|
} |
438
|
|
|
|
|
|
|
|
439
|
|
|
|
|
|
|
|
440
|
|
|
|
|
|
|
/* |
441
|
|
|
|
|
|
|
* Early trim initial and terminal matching records. |
442
|
|
|
|
|
|
|
*/ |
443
|
73
|
|
|
|
|
|
static int xdl_trim_ends(xdfile_t *xdf1, xdfile_t *xdf2) { |
444
|
|
|
|
|
|
|
long i, lim; |
445
|
|
|
|
|
|
|
xrecord_t **recs1, **recs2; |
446
|
|
|
|
|
|
|
|
447
|
73
|
|
|
|
|
|
recs1 = xdf1->recs; |
448
|
73
|
|
|
|
|
|
recs2 = xdf2->recs; |
449
|
82
|
100
|
|
|
|
|
for (i = 0, lim = XDL_MIN(xdf1->nrec, xdf2->nrec); i < lim; |
450
|
9
|
|
|
|
|
|
i++, recs1++, recs2++) |
451
|
53
|
100
|
|
|
|
|
if ((*recs1)->ha != (*recs2)->ha) |
452
|
44
|
|
|
|
|
|
break; |
453
|
|
|
|
|
|
|
|
454
|
73
|
|
|
|
|
|
xdf1->dstart = xdf2->dstart = i; |
455
|
|
|
|
|
|
|
|
456
|
73
|
|
|
|
|
|
recs1 = xdf1->recs + xdf1->nrec - 1; |
457
|
73
|
|
|
|
|
|
recs2 = xdf2->recs + xdf2->nrec - 1; |
458
|
79
|
100
|
|
|
|
|
for (lim -= i, i = 0; i < lim; i++, recs1--, recs2--) |
459
|
50
|
100
|
|
|
|
|
if ((*recs1)->ha != (*recs2)->ha) |
460
|
44
|
|
|
|
|
|
break; |
461
|
|
|
|
|
|
|
|
462
|
73
|
|
|
|
|
|
xdf1->dend = xdf1->nrec - i - 1; |
463
|
73
|
|
|
|
|
|
xdf2->dend = xdf2->nrec - i - 1; |
464
|
|
|
|
|
|
|
|
465
|
73
|
|
|
|
|
|
return 0; |
466
|
|
|
|
|
|
|
} |
467
|
|
|
|
|
|
|
|
468
|
|
|
|
|
|
|
|
469
|
73
|
|
|
|
|
|
static int xdl_optimize_ctxs(xdlclassifier_t *cf, xdfile_t *xdf1, xdfile_t *xdf2) { |
470
|
|
|
|
|
|
|
|
471
|
146
|
|
|
|
|
|
if (xdl_trim_ends(xdf1, xdf2) < 0 || |
472
|
73
|
|
|
|
|
|
xdl_cleanup_records(cf, xdf1, xdf2) < 0) { |
473
|
|
|
|
|
|
|
|
474
|
0
|
|
|
|
|
|
return -1; |
475
|
|
|
|
|
|
|
} |
476
|
|
|
|
|
|
|
|
477
|
73
|
|
|
|
|
|
return 0; |
478
|
|
|
|
|
|
|
} |