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=pod |
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=head1 NAME |
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ETL::Pipeline::Input - Role for ETL::Pipeline input sources |
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=head1 SYNOPSIS |
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use Moose; |
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with 'ETL::Pipeline::Input'; |
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sub next_record { |
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# Add code to read your data here |
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... |
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} |
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=head1 DESCRIPTION |
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L<ETL::Pipeline> reads data from an input source, transforms it, and writes |
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the information to an output destination. This role defines the required |
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methods and attributes for input sources. Every input source B<must> implement |
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B<ETL::Pipeline::Input>. |
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L<ETL::Pipeline> works by calling the methods defined in this role. The role |
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presents a common interface. It works as a shim, tying file parsing modules |
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with L<ETL::Pipeline>. For example, CSV files are parsed with the L<Text::CSV> |
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module. L<ETL::Pipeline::Input::DelimitedText> wraps around L<Text::CSV>. |
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L<ETL::Pipeline::Input::DelimitedText> implements this role by calling |
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L<Text::CSV>. |
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=head2 Adding a new input source |
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Out of the box, L<ETL::Pipeline> provides input sources for Microsoft Excel and |
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CSV (comma seperated variable) files. To add your own formats... |
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=over |
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=item 1. Create a Perl module. Name it C<ETL::Pipeline::Input::...>. |
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=item 2. Make it a Moose object: C<use Moose;>. |
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=item 3. Include the role: C<with 'ETL::Pipeline::Input';>. |
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=item 4. Add the L</next_record> method: C<sub next_record { ... }>. |
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=item 5. Add the L</configure> method: C<sub configure { ... }>. |
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=item 6. Add the L</finish> method: C<sub finish { ... }>. |
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=back |
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Ta-da! Your input source is ready to use: |
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$etl->input( 'YourNewSource' ); |
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=head2 Does B<ETL::Pipeline::Input> only work with files? |
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No. B<ETL::Pipeline::Input> works for any source of data, such as SQL queries, |
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CSV files, or network sockets. Write a L</next_record> method using whatever |
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method suits your needs. |
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This documentation refers to files because that is what I use the most. Don't |
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let that fool you! B<ETL::Pipeline::Input> was designed to work seamlessly with |
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files and non-files alike. |
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=cut |
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package ETL::Pipeline::Input; |
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use Moose::Role; |
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use 5.014000; |
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use String::Util qw/trim/; |
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our $VERSION = '2.00'; |
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=head1 METHODS & ATTRIBUTES |
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=head3 pipeline |
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B<pipeline> returns the L<ETL::Pipeline> object using this input source. You |
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can access information about the pipeline inside the methods. |
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L<ETL::Pipeline/input> automatically sets this attribute. |
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=cut |
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has 'pipeline' => ( |
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is => 'ro', |
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isa => 'ETL::Pipeline', |
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required => 1, |
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); |
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=head2 Arguments for L<ETL::Pipeline/input> |
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=head3 debug |
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While we expect perfect data, things go wrong. B<debug> lets |
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L<ETL::Pipeline/process> peek into the raw data one record at a time. I use |
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this when tracking down random problems in the middle of a 3,000 row spread |
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sheet. |
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L<ETL::Pipeline/process> executes this code reference for every record. |
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L<ETL::Pipeline/process> ignores the return value. |
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The code reference receives the current L<ETL::Pipeline> as its first parameter |
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and in C<$_>. |
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$etl->input( 'UnitTest', debug => sub { print $_->get( 'A' ) } ); |
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=cut |
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has 'debug' => ( |
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is => 'rw', |
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isa => 'Maybe[CodeRef]', |
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); |
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121
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=head3 filter |
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B<filter> does extra processing on the file data. The default filter trims |
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leading and trailing whitespace. You can use your own filter to handle special |
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values like "N/A" or "NULL". |
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Assign a code reference to B<filter>. Unlike the other code references, |
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B<filter> does not have access to the L<ETL::Pipeline> object. The filter |
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receives two array references as parameters. The first array holds the values |
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for filtering. The second array holds the arguments passed to L</get>. |
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The filter returns a list of filtered values. The results should be in the |
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same order as the values found in the input. |
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135
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$etl->input( 'UnitTest', filter => sub { |
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my ($values, $arguments) = @_; |
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map { $_ eq 'NA' ? '' : $_ } @$values; |
138
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} ); |
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=cut |
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has 'filter' => ( |
143
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default => sub { sub { |
144
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my ($values, $arguments) = @_; |
145
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return map { trim( $_ ) } @$values; |
146
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} }, |
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is => 'rw', |
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isa => 'CodeRef', |
149
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); |
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151
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around 'get' => sub { |
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my ($original, $self, @arguments) = @_; |
153
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154
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my @values = $original->( $self, @arguments ); |
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return $self->filter->( \@values, \@arguments ); |
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}; |
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159
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=head3 skip_if |
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161
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B<skip_if> accepts a code reference. L<ETL::Pipeline/process> executes this |
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code for every input record. If this code returns I<false>, |
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L<ETL::Pipeline/process> discards the record with no further processing. |
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165
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Use B<skip_if> to bypass bad data. |
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167
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The code reference receives the current L<ETL::Pipeline> as its first parameter |
168
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and in C<$_>. |
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170
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I<Note:> B<skip_if> only works on data records. It is not applied to column |
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headers. |
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173
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$etl->input( 'UnitTest', skip_if => sub { $_->get( 'A' ) eq 'DELETED' } ); |
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=cut |
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has 'skip_if' => ( |
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is => 'rw', |
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isa => 'Maybe[CodeRef]', |
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); |
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183
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=head3 stop_if |
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185
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Normally, L<ETL::Pipeline> goes until the end of the file. This code reference |
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stops processing early. If the code reference returns I<true>, L<ETL::Pipeline> |
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shuts down, just as if it reached the end of the file. |
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189
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I use this with report formats that have grand totals at the end. The totals |
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aren't real data. |
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192
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The code reference receives the current L<ETL::Pipeline> as its first parameter |
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and in C<$_>. |
194
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195
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$etl->input( 'UnitTest', stop_if => sub { $_->get( 'A' ) eq 'Totals' } ); |
196
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197
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=cut |
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199
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has 'stop_if' => ( |
200
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is => 'rw', |
201
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isa => 'Maybe[CodeRef]', |
202
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); |
203
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204
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205
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=head2 Called from L<ETL::Pipeline/process> |
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207
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=head3 next_record |
208
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209
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B<next_record> reads the next single record from the input source. |
210
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L<ETL::Pipeline/process> calls this method inside of a loop. B<next_record> |
211
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returns a boolean flag. A I<true> value means success getting the record. A |
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I<false> value indicates the end of the input - no more records. |
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214
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The implmenting class must define this method. |
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216
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while ($input->next_record) { |
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... |
218
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} |
219
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220
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=cut |
221
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222
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requires 'next_record'; |
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224
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225
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=head3 get |
226
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227
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B<get> returns a list of values from matching fields from the current record. |
228
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B<ETL::Pipeline::Input> does not define how L</next_record> stores its data |
229
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internally. You should use the format that best suits your needs. For example, |
230
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L<ETL::Pipeline::Input::Excel> uses an L<Spreadsheet::XLSX> object. It's B<get> |
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accesses object methods to retrieve fields. |
232
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233
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L<ETL::Pipeline/process> passes in the value from L<ETL::Pipeline/mapping>. |
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That can be a scalar value (string), regular expression, or array reference. |
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B<get> returns a list of values from matching fields. L<ETL::Pipeline/process> |
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passes that list directly to L<ETL::Pipeline::Output/set>. |
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B<Note:> B<ETL::Pipeline::Input> automatically passes the return values through |
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L</filter>. You should not call L</filter> from inside of the B<get> method. |
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The implmenting class must define this method. |
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# Retrieve one field named 'A'. |
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$etl->get( 'A' ); |
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# Retrieve the field from the column 'ID Num'. |
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$etl->get( qr/id\s*num/i ); |
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# A list is used to build composite field names. |
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$etl->get( '/root', '/first' ); |
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B<NOTE:> B<get> returns a list - not an individual value. Even if only one |
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field matches, B<get> still returns a list. Calling it in scalar context |
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returns the number of elements in the list - not a value. Keep this in mind |
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when calling B<get> from L</stop_if> or L</skip_if>. |
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=cut |
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requires 'get'; |
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=head3 configure |
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B<configure> prepares the input source. It can open files, make database |
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connections, or anything else required before reading the first record. |
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Why not do this in the class constructor? Some roles add automatic |
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configuration. Those roles use the usual Moose method modifiers, which would |
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not work with the constructor. |
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This B<configure> - for the input source - is called I<before> the |
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L<ETL::Pipeline::Output/configure> of the output destination. This method |
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should not rely on the configuration of the output destination. |
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The implmenting class must define this method. |
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$input->configure; |
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=cut |
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requires 'configure'; |
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=head3 finish |
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B<finish> shuts down the input source. It can close files, disconnect |
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from the database, or anything else required to cleanly terminate the input. |
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Why not do this in the class destructor? Some roles add automatic functionality |
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via Moose method modifiers. This would not work with a destructor. |
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292
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This B<finish> - for the input source - is called I<after> the |
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L<ETL::Pipeline::Output/finish> of the output destination. This method should |
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not rely on the configuration of the output destination. |
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296
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The implmenting class must define this method. |
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298
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$input->finish; |
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=cut |
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302
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requires 'finish'; |
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304
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305
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=head2 Other Methods & Attributes |
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307
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=head3 record_number |
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309
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The B<record_number> attribute tells you how many total records have been read |
310
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by L</next_record>. The count includes headers and L</skip_if> records. |
311
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312
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The first record is always B<1>. |
313
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314
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B<ETL::Pipeline::Input> automatically increments the counter after |
315
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L</next_record>. The L</next_record> method should not change B<record_number>. |
316
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317
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=head3 decrement_record_number |
318
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319
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This method decreases L</record_number> by one. It can be used to I<back out> |
320
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header records from the count. |
321
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322
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$input->decrement_record_number; |
323
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324
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=head3 increment_record_number |
325
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326
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This method increases L</record_number> by one. |
327
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328
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$input->increment_record_number; |
329
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330
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=cut |
331
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332
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has 'record_number' => ( |
333
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default => '0', |
334
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handles => { |
335
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decrement_record_number => 'dec', |
336
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increment_record_number => 'inc', |
337
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}, |
338
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is => 'ro', |
339
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isa => 'Int', |
340
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traits => [qw/Counter/], |
341
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); |
342
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343
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around 'next_record' => sub { |
344
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my $original = shift; |
345
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|
my $self = shift; |
346
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347
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|
my $result = $self->$original( @_ ); |
348
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|
$self->increment_record_number if $result; |
349
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|
return $result; |
350
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}; |
351
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352
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353
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=head1 SEE ALSO |
354
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355
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|
L<ETL::Pipeline>, L<ETL::Pipeline::Output> |
356
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357
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|
=head1 AUTHOR |
358
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359
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|
|
Robert Wohlfarth <robert.j.wohlfarth@vanderbilt.edu> |
360
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361
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=head1 LICENSE |
362
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363
|
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|
|
Copyright 2016 (c) Vanderbilt University Medical Center |
364
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365
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This program is free software; you can redistribute it and/or modify it under |
366
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|
|
the same terms as Perl itself. |
367
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368
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|
|
=cut |
369
|
|
|
|
|
|
|
|
370
|
7
|
|
|
7
|
|
33
|
no Moose; |
|
7
|
|
|
|
|
12
|
|
|
7
|
|
|
|
|
40
|
|
371
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372
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|
# Required by Perl to load the module. |
373
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|
|
1; |