| line |
stmt |
bran |
cond |
sub |
pod |
time |
code |
|
1
|
|
|
|
|
|
|
package BioX::Workflow::Command::run::Rules::Directives::Types::Glob; |
|
2
|
|
|
|
|
|
|
|
|
3
|
1
|
|
|
1
|
|
943
|
use Moose::Role; |
|
|
1
|
|
|
|
|
2
|
|
|
|
1
|
|
|
|
|
7
|
|
|
4
|
1
|
|
|
1
|
|
4630
|
use namespace::autoclean; |
|
|
1
|
|
|
|
|
3
|
|
|
|
1
|
|
|
|
|
7
|
|
|
5
|
|
|
|
|
|
|
|
|
6
|
1
|
|
|
1
|
|
54
|
use File::Glob; |
|
|
1
|
|
|
|
|
3
|
|
|
|
1
|
|
|
|
|
173
|
|
|
7
|
|
|
|
|
|
|
|
|
8
|
|
|
|
|
|
|
after 'BUILD' => sub { |
|
9
|
|
|
|
|
|
|
my $self = shift; |
|
10
|
|
|
|
|
|
|
|
|
11
|
|
|
|
|
|
|
$self->set_register_types( |
|
12
|
|
|
|
|
|
|
'glob', |
|
13
|
|
|
|
|
|
|
{ |
|
14
|
|
|
|
|
|
|
builder => 'create_reg_attr', |
|
15
|
|
|
|
|
|
|
lookup => ['.*_glob$'] |
|
16
|
|
|
|
|
|
|
} |
|
17
|
|
|
|
|
|
|
); |
|
18
|
|
|
|
|
|
|
|
|
19
|
|
|
|
|
|
|
$self->set_register_process_directives( 'glob', |
|
20
|
|
|
|
|
|
|
{ builder => 'process_directive_glob', lookup => ['.*_glob$'] } ); |
|
21
|
|
|
|
|
|
|
}; |
|
22
|
|
|
|
|
|
|
|
|
23
|
|
|
|
|
|
|
sub process_directive_glob { |
|
24
|
0
|
|
|
0
|
0
|
|
my $self = shift; |
|
25
|
0
|
|
|
|
|
|
my $k = shift; |
|
26
|
0
|
|
|
|
|
|
my $v = shift; |
|
27
|
|
|
|
|
|
|
|
|
28
|
0
|
0
|
|
|
|
|
return if $k eq 'sample_glob'; |
|
29
|
|
|
|
|
|
|
|
|
30
|
0
|
|
|
|
|
|
my $text = $self->interpol_directive($v); |
|
31
|
0
|
|
|
|
|
|
my @data = glob($text); |
|
32
|
0
|
|
|
|
|
|
$self->$k( \@data ); |
|
33
|
|
|
|
|
|
|
} |
|
34
|
|
|
|
|
|
|
|
|
35
|
|
|
|
|
|
|
1; |