File Coverage

Bio/LiveSeq/Prim_Transcript.pm

Criterion	Covered	Total	%
statement	6	6	100.0
branch			n/a
condition			n/a
subroutine	2	2	100.0
pod			n/a
total	8	8	100.0

#
# bioperl module for Bio::LiveSeq::Prim_Transcript
#
# Please direct questions and support issues to
#
# Cared for by Joseph Insana
#
# Copyright Joseph Insana
#
# You may distribute this module under the same terms as perl itself
#
# POD documentation - main docs before the code

=head1 NAME

Bio::LiveSeq::Prim_Transcript - Prim_Transcript class for LiveSeq

=head1 SYNOPSIS

  # documentation needed

=head1 DESCRIPTION

Class for PRIM_TRANSCRIPT objects. They consist of a beginlabel, an endlabel (both
referring to a LiveSeq DNA object) and a strand.
The strand could be 1 (forward strand, default), -1 (reverse strand).

=head1 AUTHOR - Joseph A.L. Insana

Email:  [e-mail], [e-mail]

=head1 APPENDIX

The rest of the documentation details each of the object
methods. Internal methods are usually preceded with a _

=cut

# Let the code begin...

package Bio::LiveSeq::Prim_Transcript;

use strict;
use base qw(Bio::LiveSeq::Range);

=head2 new

  Title   : new
  Usage   : $intron1=Bio::LiveSeq::Prim_Transcript->new(-seq => $objref,
							-start => $startlabel,
							-end => $endlabel,
							-strand => 1
							);

  Function: generates a new Bio::LiveSeq::Prim_Transcript
  Returns : reference to a new object of class Prim_Transcript
  Errorcode -1
  Args    : two labels and an integer

=cut

1;