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package Bio::Phylo::Matrices; |
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use strict; |
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use warnings; |
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use base 'Bio::Phylo::Listable'; |
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use Bio::Phylo::Util::CONSTANT qw'_NONE_ _MATRICES_'; |
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=begin comment |
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This class has no internal state, no cleanup is necessary. |
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=end comment |
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=cut |
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{ |
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my $TYPE = _MATRICES_; |
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my $CONTAINER = _NONE_; |
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=head1 NAME |
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Bio::Phylo::Matrices - Container of matrix objects |
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=head1 SYNOPSIS |
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use Bio::Phylo::Matrices; |
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use Bio::Phylo::Matrices::Matrix; |
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my $matrices = Bio::Phylo::Matrices->new; |
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my $matrix = Bio::Phylo::Matrices::Matrix->new; |
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$matrices->insert($matrix); |
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=head1 DESCRIPTION |
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The L<Bio::Phylo::Matrices> object models a set of matrices. It inherits from |
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the L<Bio::Phylo::Listable> object, and so the filtering methods of that object |
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are available to apply to a set of matrices. |
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=begin comment |
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Type : Internal method |
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Title : _container |
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Usage : $matrices->_container; |
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Function: |
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Returns : CONSTANT |
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Args : |
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=end comment |
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=cut |
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sub _container { $CONTAINER } |
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=begin comment |
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Type : Internal method |
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Title : _type |
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Usage : $matrices->_type; |
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Function: |
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Returns : CONSTANT |
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Args : |
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=end comment |
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=cut |
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sub _type { $TYPE } |
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# podinherit_insert_token |
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=head1 SEE ALSO |
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There is a mailing list at L<https://groups.google.com/forum/#!forum/bio-phylo> |
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for any user or developer questions and discussions. |
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=over |
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=item L<Bio::Phylo::Listable> |
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The L<Bio::Phylo::Matrices> object inherits from the L<Bio::Phylo::Listable> |
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object. Look there for more methods applicable to the matrices object. |
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=item L<Bio::Phylo::Manual> |
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Also see the manual: L<Bio::Phylo::Manual> and L<http://rutgervos.blogspot.com>. |
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=back |
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=head1 CITATION |
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If you use Bio::Phylo in published research, please cite it: |
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B<Rutger A Vos>, B<Jason Caravas>, B<Klaas Hartmann>, B<Mark A Jensen> |
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and B<Chase Miller>, 2011. Bio::Phylo - phyloinformatic analysis using Perl. |
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I<BMC Bioinformatics> B<12>:63. |
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L<http://dx.doi.org/10.1186/1471-2105-12-63> |
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=cut |
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} |
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1; |