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package Bio::FastParsers::Roles::Targetable; |
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# ABSTRACT: Target attrs common to HMMER Standard::Target and Table::Hit |
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# CONTRIBUTOR: Arnaud DI FRANCO <arnaud.difranco@gmail.com> |
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$Bio::FastParsers::Roles::Targetable::VERSION = '0.213510'; |
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use Moose::Role; |
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use autodie; |
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use feature qw(say); |
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use Bio::FastParsers::Types; |
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use Bio::FastParsers::Constants qw(:files); |
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has $_ => ( |
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is => 'ro', |
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isa => 'Str', |
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required => 1, |
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) for qw(target_name query_name); |
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has $_ => ( |
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is => 'ro', |
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isa => 'Maybe[Str]', |
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required => 1, |
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) for qw(target_description); |
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has $_ => ( |
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is => 'ro', |
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isa => 'Num', |
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required => 1, |
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) for qw( |
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evalue score bias |
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best_dom_evalue best_dom_score best_dom_bias |
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exp dom |
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); |
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sub expect { |
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return shift->evalue; |
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} |
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sub name { |
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return shift->target_name; |
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} |
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no Moose::Role; |
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1; |
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__END__ |
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=pod |
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=head1 NAME |
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Bio::FastParsers::Roles::Targetable - Target attrs common to HMMER Standard::Target and Table::Hit |
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=head1 VERSION |
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version 0.213510 |
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=head1 SYNOPSIS |
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# TODO |
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=head1 DESCRIPTION |
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# TODO |
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=head1 ALIASES |
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=head2 expect |
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Alias for C<evalue> method. For API consistency. |
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=head1 AUTHOR |
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Denis BAURAIN <denis.baurain@uliege.be> |
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=head1 CONTRIBUTOR |
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=for stopwords Arnaud DI FRANCO |
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Arnaud DI FRANCO <arnaud.difranco@gmail.com> |
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=head1 COPYRIGHT AND LICENSE |
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This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN. |
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This is free software; you can redistribute it and/or modify it under |
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the same terms as the Perl 5 programming language system itself. |
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=cut |