line |
stmt |
bran |
cond |
sub |
pod |
time |
code |
1
|
|
|
|
|
|
|
package Astro::FITS::CFITSIO::Simple::Image; |
2
|
|
|
|
|
|
|
|
3
|
|
|
|
|
|
|
# ABSTRACT: Read FITS Images |
4
|
|
|
|
|
|
|
|
5
|
11
|
|
|
11
|
|
227
|
use 5.008002; |
|
11
|
|
|
|
|
42
|
|
6
|
11
|
|
|
11
|
|
59
|
use strict; |
|
11
|
|
|
|
|
23
|
|
|
11
|
|
|
|
|
228
|
|
7
|
11
|
|
|
11
|
|
53
|
use warnings; |
|
11
|
|
|
|
|
23
|
|
|
11
|
|
|
|
|
448
|
|
8
|
|
|
|
|
|
|
|
9
|
|
|
|
|
|
|
require Exporter; |
10
|
|
|
|
|
|
|
|
11
|
11
|
|
|
11
|
|
66
|
use Params::Validate qw/ :all /; |
|
11
|
|
|
|
|
23
|
|
|
11
|
|
|
|
|
1931
|
|
12
|
|
|
|
|
|
|
|
13
|
11
|
|
|
11
|
|
79
|
use Carp; |
|
11
|
|
|
|
|
22
|
|
|
11
|
|
|
|
|
616
|
|
14
|
|
|
|
|
|
|
|
15
|
11
|
|
|
11
|
|
68
|
use PDL; |
|
11
|
|
|
|
|
31
|
|
|
11
|
|
|
|
|
79
|
|
16
|
|
|
|
|
|
|
|
17
|
11
|
|
|
11
|
|
31501
|
use Astro::FITS::CFITSIO qw/ :constants /; |
|
11
|
|
|
|
|
27
|
|
|
11
|
|
|
|
|
9336
|
|
18
|
11
|
|
|
11
|
|
85
|
use Astro::FITS::CFITSIO::CheckStatus; |
|
11
|
|
|
|
|
25
|
|
|
11
|
|
|
|
|
289
|
|
19
|
11
|
|
|
11
|
|
59
|
use Astro::FITS::CFITSIO::Simple::PDL qw/ :all /; |
|
11
|
|
|
|
|
27
|
|
|
11
|
|
|
|
|
1177
|
|
20
|
11
|
|
|
11
|
|
75
|
use Astro::FITS::Header; |
|
11
|
|
|
|
|
48
|
|
|
11
|
|
|
|
|
266
|
|
21
|
11
|
|
|
11
|
|
60
|
use Astro::FITS::Header::CFITSIO; |
|
11
|
|
|
|
|
38
|
|
|
11
|
|
|
|
|
4965
|
|
22
|
|
|
|
|
|
|
|
23
|
|
|
|
|
|
|
our @ISA = qw(Exporter); |
24
|
|
|
|
|
|
|
|
25
|
|
|
|
|
|
|
# Items to export into callers namespace by default. Note: do not export |
26
|
|
|
|
|
|
|
# names by default without a very good reason. Use EXPORT_OK instead. |
27
|
|
|
|
|
|
|
# Do not simply export all your public functions/methods/constants. |
28
|
|
|
|
|
|
|
|
29
|
|
|
|
|
|
|
# This allows declaration use Astro::FITS::CFITSIO::Table ':all'; |
30
|
|
|
|
|
|
|
# If you do not need this, moving things directly into @EXPORT or @EXPORT_OK |
31
|
|
|
|
|
|
|
# will save memory. |
32
|
|
|
|
|
|
|
our %EXPORT_TAGS = ( |
33
|
|
|
|
|
|
|
'all' => [ qw( |
34
|
|
|
|
|
|
|
_rdfitsImage |
35
|
|
|
|
|
|
|
) ] ); |
36
|
|
|
|
|
|
|
|
37
|
|
|
|
|
|
|
our @EXPORT_OK = ( @{ $EXPORT_TAGS{'all'} } ); |
38
|
|
|
|
|
|
|
|
39
|
|
|
|
|
|
|
our @EXPORT = qw( |
40
|
|
|
|
|
|
|
|
41
|
|
|
|
|
|
|
); |
42
|
|
|
|
|
|
|
|
43
|
|
|
|
|
|
|
our $VERSION = '0.20'; |
44
|
|
|
|
|
|
|
|
45
|
|
|
|
|
|
|
# this must be called ONLY from rdfits. it makes assumptions about |
46
|
|
|
|
|
|
|
# the validity of arguments that have been verified by rdfits. |
47
|
|
|
|
|
|
|
|
48
|
|
|
|
|
|
|
sub _rdfitsImage { |
49
|
|
|
|
|
|
|
|
50
|
10
|
50
|
|
10
|
|
49
|
my $opts = 'HASH' eq ref $_[-1] ? pop : {}; |
51
|
|
|
|
|
|
|
|
52
|
|
|
|
|
|
|
# first arg is fitsfilePtr |
53
|
|
|
|
|
|
|
# second is cleanup object; must keep around until we're done, |
54
|
|
|
|
|
|
|
# so it'll cleanup at the correct time. |
55
|
10
|
|
|
|
|
19
|
my $fptr = shift; |
56
|
|
|
|
|
|
|
|
57
|
|
|
|
|
|
|
# we don't expect any more arguments; complain if we do... |
58
|
10
|
50
|
|
|
|
37
|
croak( "unexpected extra arguments in call to rdfitsImage\n" ) |
59
|
|
|
|
|
|
|
if @_; |
60
|
|
|
|
|
|
|
|
61
|
|
|
|
|
|
|
my %opt = validate_with( |
62
|
|
|
|
|
|
|
params => [$opts], |
63
|
28
|
|
|
28
|
|
538
|
normalize_keys => sub { lc $_[0] }, |
64
|
10
|
|
|
|
|
229
|
spec => { |
65
|
|
|
|
|
|
|
nullval => { type => SCALAR, optional => 1 }, |
66
|
|
|
|
|
|
|
dtype => { isa => 'PDL::Type', optional => 1 }, |
67
|
|
|
|
|
|
|
}, |
68
|
|
|
|
|
|
|
); |
69
|
|
|
|
|
|
|
|
70
|
8
|
|
|
|
|
87
|
tie my $status, 'Astro::FITS::CFITSIO::CheckStatus'; |
71
|
|
|
|
|
|
|
|
72
|
|
|
|
|
|
|
# get image type and size |
73
|
8
|
|
|
|
|
376
|
$fptr->get_img_equivtype( my $btype, $status ); |
74
|
8
|
|
|
|
|
270
|
$fptr->get_img_size( \my @naxes, $status ); |
75
|
|
|
|
|
|
|
|
76
|
|
|
|
|
|
|
# what's the PDL type that encompasses the CFITSIO type? |
77
|
8
|
100
|
|
|
|
224
|
my $ptype = $opt{dtype} ? $opt{dtype} : fits2pdl_imgtype( $btype ); |
78
|
8
|
|
|
|
|
108
|
my $data = PDL->new_from_specification( $ptype, @naxes ); |
79
|
|
|
|
|
|
|
|
80
|
|
|
|
|
|
|
# grab header, delete scaling keywords, stuff it into piddle |
81
|
8
|
|
|
|
|
677
|
my $hdr = Astro::FITS::Header::CFITSIO->new( fitsID => $fptr ); |
82
|
8
|
|
|
|
|
11182
|
tie my %hdr, 'Astro::FITS::Header', $hdr; |
83
|
8
|
|
|
|
|
124
|
delete @hdr{qw/ BSCALE BZERO /}; |
84
|
8
|
|
|
|
|
2164
|
$data->sethdr( \%hdr ); |
85
|
|
|
|
|
|
|
|
86
|
|
|
|
|
|
|
# what we tell CFITSIO that we're reading. some deception, |
87
|
|
|
|
|
|
|
# as all we care about is the size of the data type |
88
|
8
|
|
|
|
|
30
|
my $ctype = pdl2cfitsio( $ptype ); |
89
|
|
|
|
|
|
|
|
90
|
|
|
|
|
|
|
# How to handle null pixels. A nullval of zero signals CFITSIO to |
91
|
|
|
|
|
|
|
# ignore null pixels |
92
|
|
|
|
|
|
|
my $nullval |
93
|
|
|
|
|
|
|
= exists $opt{nullval} ? $opt{nullval} |
94
|
8
|
50
|
|
|
|
45
|
: $PDL::Bad::Status ? my_badvalue( $ptype ) |
|
|
50
|
|
|
|
|
|
95
|
|
|
|
|
|
|
: 0; |
96
|
|
|
|
|
|
|
|
97
|
|
|
|
|
|
|
$fptr->read_pix( |
98
|
|
|
|
|
|
|
$ctype, [ ( 1 ) x @naxes ], |
99
|
8
|
|
|
|
|
347
|
$data->nelem, $nullval, ${ $data->get_dataref }, |
|
8
|
|
|
|
|
156
|
|
100
|
|
|
|
|
|
|
my $anynul, $status |
101
|
|
|
|
|
|
|
); |
102
|
8
|
|
|
|
|
543
|
$data->upd_data; |
103
|
|
|
|
|
|
|
|
104
|
8
|
50
|
|
|
|
61
|
$data->badflag( $anynul ) if $PDL::Bad::Status; |
105
|
|
|
|
|
|
|
|
106
|
8
|
|
|
|
|
247
|
$data; |
107
|
|
|
|
|
|
|
} |
108
|
|
|
|
|
|
|
|
109
|
|
|
|
|
|
|
1; |
110
|
|
|
|
|
|
|
|
111
|
|
|
|
|
|
|
# |
112
|
|
|
|
|
|
|
# This file is part of Astro-FITS-CFITSIO-Simple |
113
|
|
|
|
|
|
|
# |
114
|
|
|
|
|
|
|
# This software is Copyright (c) 2008 by Smithsonian Astrophysical Observatory. |
115
|
|
|
|
|
|
|
# |
116
|
|
|
|
|
|
|
# This is free software, licensed under: |
117
|
|
|
|
|
|
|
# |
118
|
|
|
|
|
|
|
# The GNU General Public License, Version 3, June 2007 |
119
|
|
|
|
|
|
|
# |
120
|
|
|
|
|
|
|
|
121
|
|
|
|
|
|
|
__END__ |