line |
stmt |
bran |
cond |
sub |
pod |
time |
code |
1
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package Archive::BagIt; |
2
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9
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9
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372711
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use strict; |
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9
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41
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9
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299
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3
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9
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9
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50
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use warnings; |
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9
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19
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9
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272
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4
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9
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9
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1888
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use utf8; |
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9
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54
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9
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48
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5
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9
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9
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1681
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use open ':std', ':encoding(UTF-8)'; |
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9
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3814
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9
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67
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6
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9
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9
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41798
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use Encode qw( decode ); |
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9
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16
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9
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759
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7
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9
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9
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65
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use File::Spec (); |
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9
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14
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9
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216
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8
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9
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9
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4403
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use Class::Load qw( load_class ); |
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9
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174073
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9
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577
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9
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9
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9
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84
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use Carp qw( carp croak confess); |
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9
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27
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9
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472
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10
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9
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9
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3057
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use POSIX qw( strftime ); |
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9
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38830
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9
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69
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11
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9
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9
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14524
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use Moo; |
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9
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70870
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9
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70
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12
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with "Archive::BagIt::Role::Portability"; |
13
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14
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our $VERSION = '0.095'; # VERSION |
15
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16
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# ABSTRACT: The main module to handle bags. |
17
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18
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19
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20
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around 'BUILDARGS' , sub { |
21
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my $orig = shift; |
22
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my $class = shift; |
23
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if (@_ == 1 && !ref $_[0]) { |
24
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return $class->$orig(bag_path=>$_[0]); |
25
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} else { |
26
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return $class->$orig(@_); |
27
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} |
28
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}; |
29
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30
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31
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sub BUILD { |
32
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84
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84
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0
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3574
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my ($self, $args) = @_; |
33
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84
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100
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295
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if (!defined $self->use_plugins()) { |
34
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83
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199
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return $self->load_plugins(("Archive::BagIt::Plugin::Manifest::MD5", "Archive::BagIt::Plugin::Manifest::SHA512")); |
35
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} |
36
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1
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6
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return $self->load_plugins($self->use_plugins()); |
37
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} |
38
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39
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############################################### |
40
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41
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42
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has 'use_parallel' => ( |
43
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is => 'rw', |
44
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lazy => 1, |
45
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default => 0, |
46
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); |
47
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48
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############################################### |
49
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50
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51
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has 'use_async' => ( |
52
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is => 'rw', |
53
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lazy => 1, |
54
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default => 0, |
55
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); |
56
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57
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############################################### |
58
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59
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60
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has 'force_utf8' => ( |
61
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is => 'rw', |
62
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lazy => 1, |
63
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predicate => 'has_force_utf8', |
64
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); |
65
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66
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############################################### |
67
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68
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69
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has 'bag_path' => ( |
70
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is => 'rw', |
71
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); |
72
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73
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# if the user wants specific plugins! |
74
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has 'use_plugins' => ( |
75
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is => 'rw', |
76
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lazy => 1, |
77
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); |
78
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79
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############################################### |
80
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81
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has 'bag_path_arr' => ( |
82
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is => 'ro', |
83
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lazy => 1, |
84
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builder => '_build_bag_path_arr', |
85
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); |
86
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87
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############################################### |
88
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89
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90
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has 'metadata_path' => ( |
91
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is=> 'ro', |
92
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lazy => 1, |
93
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builder => '_build_metadata_path', |
94
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); |
95
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96
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sub _build_metadata_path { |
97
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68
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68
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525
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my ($self) = @_; |
98
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68
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453
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return $self->bag_path; |
99
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} |
100
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101
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############################################### |
102
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103
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|
has 'metadata_path_arr' => ( |
104
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is =>'ro', |
105
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lazy => 1, |
106
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builder => '_build_metadata_path_arr', |
107
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); |
108
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|
109
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|
110
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|
############################################### |
111
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112
|
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has 'rel_metadata_path' => ( |
113
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is => 'ro', |
114
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lazy => 1, |
115
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builder => '_build_rel_metadata_path', |
116
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); |
117
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118
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|
############################################### |
119
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120
|
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121
|
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has 'payload_path' => ( |
122
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is => 'ro', |
123
|
|
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lazy => 1, |
124
|
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builder => '_build_payload_path', |
125
|
|
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|
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); |
126
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|
127
|
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|
|
|
|
sub _build_payload_path { |
128
|
60
|
|
|
60
|
|
484
|
my ($self) = @_; |
129
|
60
|
|
|
|
|
1495
|
return File::Spec->catdir($self->bag_path, "data"); |
130
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|
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|
} |
131
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|
132
|
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|
############################################### |
133
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134
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has 'payload_path_arr' => ( |
135
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is => 'ro', |
136
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lazy => 1, |
137
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builder => '_build_payload_path_arr', |
138
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); |
139
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140
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############################################### |
141
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142
|
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has 'rel_payload_path' => ( |
143
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is => 'ro', |
144
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lazy => 1, |
145
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builder => '_build_rel_payload_path', |
146
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); |
147
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148
|
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|
############################################### |
149
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150
|
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151
|
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has 'checksum_algos' => ( |
152
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is => 'ro', |
153
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lazy => 1, |
154
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builder => '_build_checksum_algos', |
155
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); |
156
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157
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############################################### |
158
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159
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160
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has 'bag_version' => ( |
161
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is => 'ro', |
162
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lazy => 1, |
163
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builder => '_build_bag_version', |
164
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); |
165
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166
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|
############################################### |
167
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168
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169
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has 'bag_encoding' => ( |
170
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is => 'ro', |
171
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lazy => 1, |
172
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builder => '_build_bag_encoding', |
173
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); |
174
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175
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|
############################################### |
176
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177
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178
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has 'bag_info' => ( |
179
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is => 'rw', |
180
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lazy => 1, |
181
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builder => '_build_bag_info', |
182
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predicate => 'has_bag_info' |
183
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|
|
|
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); |
184
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185
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|
############################################### |
186
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187
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188
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has 'errors' => ( |
189
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is => 'ro', |
190
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|
lazy => 1, |
191
|
0
|
|
|
0
|
|
0
|
builder => sub { my $self = shift; return [];}, |
|
0
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0
|
|
192
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); |
193
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194
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|
############################################### |
195
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196
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197
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198
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has 'warnings' => ( |
199
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is => 'ro', |
200
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lazy => 1, |
201
|
0
|
|
|
0
|
|
0
|
builder => sub { my $self = shift; return [];}, |
|
0
|
|
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0
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|
202
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); |
203
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204
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############################################### |
205
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206
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207
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has 'digest_callback' => ( |
208
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is => 'ro', |
209
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lazy => 1, |
210
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|
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builder => sub { |
211
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|
|
my $sub = sub { |
212
|
549
|
|
|
549
|
|
928
|
my ($digestobj, $filename) = @_; |
213
|
549
|
50
|
|
|
|
9312
|
if (-f $filename) { |
214
|
549
|
50
|
|
|
|
18858
|
open(my $fh, '<:raw', $filename) or confess("Cannot open '$filename', $!"); |
215
|
549
|
|
|
|
|
1595
|
binmode($fh); |
216
|
549
|
|
|
|
|
1827
|
my $digest = $digestobj->get_hash_string($fh); |
217
|
549
|
50
|
|
|
|
6617
|
close $fh or confess("could not close file '$filename', $!"); |
218
|
549
|
|
|
|
|
3295
|
return $digest; |
219
|
|
|
|
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|
|
} else { |
220
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0
|
|
|
|
|
0
|
croak "file $filename is not a real file!"; |
221
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|
|
|
|
|
|
} |
222
|
36
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|
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36
|
|
525
|
}; |
223
|
36
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|
|
109
|
return $sub; |
224
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|
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|
|
} |
225
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); |
226
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227
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############################################### |
228
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229
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230
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|
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|
|
sub get_baginfo_values_by_key { |
231
|
111
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|
|
111
|
1
|
1178
|
my ($self, $searchkey) = @_; |
232
|
111
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|
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|
|
2143
|
my $info = $self->bag_info(); |
233
|
111
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|
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|
585
|
my @values; |
234
|
111
|
50
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|
|
|
205
|
if (defined $searchkey) { |
235
|
111
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|
|
218
|
my $lc_flag = $self->is_baginfo_key_reserved( $searchkey ); |
236
|
111
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|
|
168
|
foreach my $entry (@{ $info }) { |
|
111
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271
|
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237
|
363
|
50
|
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561
|
return unless defined $entry; |
238
|
363
|
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355
|
my ($key, $value) = %{ $entry }; |
|
363
|
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|
716
|
|
239
|
363
|
100
|
|
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|
561
|
if ( __case_aware_compare_for_baginfo( $key, $searchkey, $lc_flag) ) { |
240
|
64
|
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|
171
|
push @values, $value; |
241
|
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|
} |
242
|
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|
|
} |
243
|
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|
|
} |
244
|
111
|
100
|
|
|
|
368
|
return @values if (scalar(@values) > 0); |
245
|
48
|
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|
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|
123
|
return; |
246
|
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|
|
} |
247
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248
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|
############################################### |
249
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250
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251
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|
|
sub is_baginfo_key_reserved_as_uniq { |
252
|
278
|
|
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278
|
1
|
401
|
my ($self, $searchkey) = @_; |
253
|
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|
|
# my $rx = qr{Bag-Count|Bag-Group-Identifier|Bag-Size|Bagging-Date|Payload-Oxum}; |
254
|
278
|
|
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|
|
1022
|
return $searchkey =~ m/^(?:Bag(?:-(?:Group-Identifier|Count|Size)|ging-Date)|Payload-Oxum)$/i; |
255
|
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|
|
} |
256
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257
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|
############################################### |
258
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259
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260
|
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|
|
sub is_baginfo_key_reserved { |
261
|
390
|
|
|
390
|
1
|
623
|
my ($self, $searchkey) = @_; |
262
|
|
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|
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|
|
# my $rx = qr/ |
263
|
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|
|
# Bag-Count| |
264
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|
# Bag-Group-Identifier| |
265
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|
# Bag-Size| |
266
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|
# Bagging-Date| |
267
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|
|
# Contact-Email| |
268
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|
|
# Contact-Name| |
269
|
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|
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|
|
# Contact-Phone| |
270
|
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|
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|
|
# External-Description| |
271
|
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|
|
# External-Identifier| |
272
|
|
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|
|
|
|
# Internal-Sender-Description| |
273
|
|
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|
|
# Internal-Sender-Identifier| |
274
|
|
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|
|
|
|
# Organisation-Adress| |
275
|
|
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|
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|
|
# Payload-Oxum| |
276
|
|
|
|
|
|
|
# Source-Organization |
277
|
|
|
|
|
|
|
# /; |
278
|
390
|
|
|
|
|
1584
|
return $searchkey =~ m/^(?:Bag(?:-(?:Group-Identifier|Count|Size)|ging-Date)|Internal-Sender-(?:Description|Identifier)|External-(?:Description|Identifier)|Contact-(?:(?:Phon|Nam)e|Email)|Source-Organization|Organisation-Adress|Payload-Oxum)$/ix; |
279
|
|
|
|
|
|
|
} |
280
|
|
|
|
|
|
|
|
281
|
|
|
|
|
|
|
############################################### |
282
|
|
|
|
|
|
|
|
283
|
|
|
|
|
|
|
sub __case_aware_compare_for_baginfo { |
284
|
482
|
|
|
482
|
|
766
|
my ($internal_key, $search_key, $lc_flag) = @_; |
285
|
482
|
|
33
|
|
|
2790
|
return (defined $internal_key) && ( |
286
|
|
|
|
|
|
|
( $lc_flag && ((lc $internal_key) eq (lc $search_key)) ) # for reserved keys use caseinsensitive search |
287
|
|
|
|
|
|
|
|| |
288
|
|
|
|
|
|
|
( (!$lc_flag) && ($internal_key eq $search_key) ) # for other keys sensitive search |
289
|
|
|
|
|
|
|
) |
290
|
|
|
|
|
|
|
} |
291
|
|
|
|
|
|
|
|
292
|
|
|
|
|
|
|
############################################### |
293
|
|
|
|
|
|
|
|
294
|
|
|
|
|
|
|
sub _find_baginfo_idx { |
295
|
58
|
|
|
58
|
|
134
|
my ($self, $searchkey) = @_; |
296
|
58
|
50
|
|
|
|
108
|
if (defined $searchkey) { |
297
|
58
|
100
|
|
|
|
129
|
if (-1 < index($searchkey, ":")) {croak "key should not contain a colon! (searchkey='$searchkey')";} |
|
1
|
|
|
|
|
12
|
|
298
|
57
|
|
|
|
|
1269
|
my $info = $self->bag_info(); |
299
|
57
|
|
|
|
|
355
|
my $size = scalar(@{$info}); |
|
57
|
|
|
|
|
93
|
|
300
|
57
|
|
|
|
|
115
|
my $lc_flag = $self->is_baginfo_key_reserved($searchkey); |
301
|
57
|
|
|
|
|
161
|
foreach my $idx (reverse 0.. $size-1) { # for multiple entries return the latest addition |
302
|
119
|
|
|
|
|
135
|
my %entry = %{$info->[$idx]}; |
|
119
|
|
|
|
|
353
|
|
303
|
119
|
|
|
|
|
243
|
my ($key, $value) = %entry; |
304
|
119
|
100
|
|
|
|
198
|
if (__case_aware_compare_for_baginfo($key, $searchkey, $lc_flag)) { |
305
|
16
|
|
|
|
|
51
|
return $idx; |
306
|
|
|
|
|
|
|
} |
307
|
|
|
|
|
|
|
} |
308
|
|
|
|
|
|
|
} |
309
|
41
|
|
|
|
|
90
|
return; |
310
|
|
|
|
|
|
|
} |
311
|
|
|
|
|
|
|
############################################### |
312
|
|
|
|
|
|
|
|
313
|
|
|
|
|
|
|
|
314
|
|
|
|
|
|
|
sub verify_baginfo { |
315
|
56
|
|
|
56
|
1
|
83
|
my ($self) = @_; |
316
|
56
|
|
|
|
|
62
|
my %keys; |
317
|
56
|
|
|
|
|
1192
|
my $info = $self->bag_info(); |
318
|
56
|
|
|
|
|
157
|
my $ret = 1; |
319
|
56
|
100
|
|
|
|
112
|
if (defined $info) { |
320
|
49
|
|
|
|
|
55
|
foreach my $entry (@{$self->bag_info()}) { |
|
49
|
|
|
|
|
956
|
|
321
|
222
|
|
|
|
|
520
|
my ($key, $value) = %{$entry}; |
|
222
|
|
|
|
|
547
|
|
322
|
222
|
100
|
|
|
|
382
|
if ($self->is_baginfo_key_reserved($key)) { |
323
|
173
|
|
|
|
|
535
|
$keys{ lc $key }++; |
324
|
|
|
|
|
|
|
} |
325
|
|
|
|
|
|
|
else { |
326
|
49
|
|
|
|
|
134
|
$keys{ $key }++ |
327
|
|
|
|
|
|
|
} |
328
|
|
|
|
|
|
|
} |
329
|
49
|
|
|
|
|
141
|
foreach my $key (keys %keys) { |
330
|
222
|
100
|
|
|
|
350
|
if ($self->is_baginfo_key_reserved_as_uniq($key)) { |
331
|
129
|
50
|
|
|
|
331
|
if ($keys{$key} > 1) { |
332
|
0
|
|
|
|
|
0
|
push @{$self->{errors}}, "Baginfo key '$key' exists $keys{$key}, but should be uniq!"; |
|
0
|
|
|
|
|
0
|
|
333
|
0
|
|
|
|
|
0
|
$ret = undef; |
334
|
|
|
|
|
|
|
} |
335
|
|
|
|
|
|
|
} |
336
|
|
|
|
|
|
|
} |
337
|
|
|
|
|
|
|
} |
338
|
|
|
|
|
|
|
# check for payload oxum |
339
|
56
|
|
|
|
|
135
|
my ($loaded_payloadoxum) = $self->get_baginfo_values_by_key('Payload-Oxum'); |
340
|
56
|
100
|
|
|
|
110
|
if (defined $loaded_payloadoxum) { |
341
|
47
|
|
|
|
|
152
|
my ($octets, $streamcount) = $self->calc_payload_oxum(); |
342
|
47
|
100
|
|
|
|
168
|
if ("$octets.$streamcount" ne $loaded_payloadoxum) { |
343
|
5
|
|
|
|
|
6
|
push @{$self->{errors}}, "Payload-Oxum differs, calculated $octets.$streamcount but $loaded_payloadoxum was expected by bag-info.txt"; |
|
5
|
|
|
|
|
31
|
|
344
|
5
|
|
|
|
|
10
|
$ret = undef; |
345
|
|
|
|
|
|
|
} |
346
|
|
|
|
|
|
|
} else { |
347
|
9
|
|
|
|
|
30
|
push @{$self->{warnings}}, "Payload-Oxum was expected in bag-info.txt, but not found!"; # payload-oxum is recommended, but optional |
|
9
|
|
|
|
|
35
|
|
348
|
|
|
|
|
|
|
} |
349
|
56
|
|
|
|
|
188
|
return $ret; |
350
|
|
|
|
|
|
|
} |
351
|
|
|
|
|
|
|
|
352
|
|
|
|
|
|
|
############################################### |
353
|
|
|
|
|
|
|
|
354
|
|
|
|
|
|
|
|
355
|
|
|
|
|
|
|
sub delete_baginfo_by_key { |
356
|
3
|
|
|
3
|
1
|
1591
|
my ($self, $searchkey) = @_; |
357
|
3
|
|
|
|
|
8
|
my $idx = $self->_find_baginfo_idx($searchkey); |
358
|
3
|
100
|
|
|
|
10
|
if (defined $idx) { |
359
|
2
|
|
|
|
|
3
|
splice @{$self->{bag_info}}, $idx, 1; # delete nth indexed entry |
|
2
|
|
|
|
|
4
|
|
360
|
|
|
|
|
|
|
} |
361
|
3
|
|
|
|
|
15
|
return 1; |
362
|
|
|
|
|
|
|
} |
363
|
|
|
|
|
|
|
|
364
|
|
|
|
|
|
|
############################################### |
365
|
|
|
|
|
|
|
|
366
|
|
|
|
|
|
|
|
367
|
|
|
|
|
|
|
sub exists_baginfo_key { |
368
|
2
|
|
|
2
|
1
|
5
|
my ($self, $searchkey) =@_; |
369
|
2
|
|
|
|
|
7
|
return (defined $self->_find_baginfo_idx($searchkey)); |
370
|
|
|
|
|
|
|
} |
371
|
|
|
|
|
|
|
|
372
|
|
|
|
|
|
|
############################################### |
373
|
|
|
|
|
|
|
|
374
|
|
|
|
|
|
|
sub _replace_baginfo_by_first_match { |
375
|
53
|
|
|
53
|
|
935
|
my ($self, $searchkey, $newvalue) = @_; |
376
|
53
|
|
|
|
|
117
|
my $idx = $self->_find_baginfo_idx( $searchkey); |
377
|
52
|
100
|
|
|
|
112
|
if (defined $idx) { |
378
|
13
|
|
|
|
|
50
|
$self->{bag_info}[$idx] = {$searchkey => $newvalue}; |
379
|
13
|
|
|
|
|
24
|
return $idx; |
380
|
|
|
|
|
|
|
} |
381
|
39
|
|
|
|
|
62
|
return; |
382
|
|
|
|
|
|
|
} |
383
|
|
|
|
|
|
|
|
384
|
|
|
|
|
|
|
############################################### |
385
|
|
|
|
|
|
|
|
386
|
|
|
|
|
|
|
|
387
|
|
|
|
|
|
|
sub append_baginfo_by_key { |
388
|
56
|
|
|
56
|
1
|
607
|
my ($self, $searchkey, $newvalue) = @_; |
389
|
56
|
50
|
|
|
|
106
|
if (defined $searchkey) { |
390
|
56
|
50
|
|
|
|
122
|
if (-1 < index($searchkey, ":")) { croak "key should not contain a colon! (searchkey='$searchkey')"; } |
|
0
|
|
|
|
|
0
|
|
391
|
56
|
100
|
|
|
|
119
|
if ($self->is_baginfo_key_reserved_as_uniq($searchkey)) { |
392
|
41
|
100
|
|
|
|
103
|
if (defined $self->get_baginfo_values_by_key($searchkey)) { |
393
|
|
|
|
|
|
|
# hmm, search key is marked as uniq and still exists |
394
|
5
|
|
|
|
|
14
|
return; |
395
|
|
|
|
|
|
|
} |
396
|
|
|
|
|
|
|
} |
397
|
51
|
|
|
|
|
71
|
push @{$self->{bag_info}}, {$searchkey => $newvalue}; |
|
51
|
|
|
|
|
576
|
|
398
|
|
|
|
|
|
|
} |
399
|
51
|
|
|
|
|
86
|
return 1; |
400
|
|
|
|
|
|
|
} |
401
|
|
|
|
|
|
|
|
402
|
|
|
|
|
|
|
############################################### |
403
|
|
|
|
|
|
|
|
404
|
|
|
|
|
|
|
|
405
|
|
|
|
|
|
|
sub add_or_replace_baginfo_by_key { |
406
|
67
|
|
|
67
|
1
|
800
|
my ($self, $searchkey, $newvalue) = @_; |
407
|
67
|
50
|
|
|
|
164
|
if (defined $searchkey) { |
408
|
67
|
100
|
|
|
|
178
|
if (-1 < index($searchkey, ":")) { croak "key should not contain a colon! (searchkey='$searchkey')"; } |
|
1
|
|
|
|
|
20
|
|
409
|
66
|
100
|
|
|
|
164
|
if (defined $self->{bag_info}) { |
410
|
50
|
|
|
|
|
121
|
my $idx = $self->_replace_baginfo_by_first_match( $searchkey, $newvalue); |
411
|
50
|
100
|
|
|
|
132
|
if (defined $idx) { return $idx;} |
|
12
|
|
|
|
|
17
|
|
412
|
|
|
|
|
|
|
} |
413
|
54
|
|
|
|
|
129
|
$self->append_baginfo_by_key( $searchkey, $newvalue ); |
414
|
54
|
|
|
|
|
90
|
return -1; |
415
|
|
|
|
|
|
|
} |
416
|
|
|
|
|
|
|
} |
417
|
|
|
|
|
|
|
|
418
|
|
|
|
|
|
|
############################################### |
419
|
|
|
|
|
|
|
|
420
|
|
|
|
|
|
|
|
421
|
|
|
|
|
|
|
has 'forced_fixity_algorithm' => ( |
422
|
|
|
|
|
|
|
is => 'ro', |
423
|
|
|
|
|
|
|
lazy => 1, |
424
|
|
|
|
|
|
|
builder => '_build_forced_fixity_algorithm', |
425
|
|
|
|
|
|
|
); |
426
|
|
|
|
|
|
|
|
427
|
|
|
|
|
|
|
sub has_forced_fixity_algorithm { |
428
|
49
|
|
|
49
|
0
|
83
|
my $self = shift; |
429
|
49
|
|
|
|
|
1024
|
return (defined $self->forced_fixity_algorithm() ); |
430
|
|
|
|
|
|
|
} # false if use_plugins used |
431
|
|
|
|
|
|
|
|
432
|
|
|
|
|
|
|
############################################### |
433
|
|
|
|
|
|
|
|
434
|
|
|
|
|
|
|
|
435
|
|
|
|
|
|
|
has 'manifest_files' => ( |
436
|
|
|
|
|
|
|
is => 'ro', |
437
|
|
|
|
|
|
|
lazy => 1, |
438
|
|
|
|
|
|
|
builder => '_build_manifest_files', |
439
|
|
|
|
|
|
|
); |
440
|
|
|
|
|
|
|
|
441
|
|
|
|
|
|
|
############################################### |
442
|
|
|
|
|
|
|
|
443
|
|
|
|
|
|
|
|
444
|
|
|
|
|
|
|
has 'tagmanifest_files' => ( |
445
|
|
|
|
|
|
|
is => 'ro', |
446
|
|
|
|
|
|
|
lazy => 1, |
447
|
|
|
|
|
|
|
builder => '_build_tagmanifest_files', |
448
|
|
|
|
|
|
|
); |
449
|
|
|
|
|
|
|
|
450
|
|
|
|
|
|
|
############################################### |
451
|
|
|
|
|
|
|
|
452
|
|
|
|
|
|
|
|
453
|
|
|
|
|
|
|
has 'payload_files' => ( # relatively to bagit base |
454
|
|
|
|
|
|
|
is => 'ro', |
455
|
|
|
|
|
|
|
lazy => 1, |
456
|
|
|
|
|
|
|
builder => '_build_payload_files', |
457
|
|
|
|
|
|
|
); |
458
|
|
|
|
|
|
|
|
459
|
|
|
|
|
|
|
############################################### |
460
|
|
|
|
|
|
|
|
461
|
|
|
|
|
|
|
|
462
|
|
|
|
|
|
|
has 'non_payload_files' => ( |
463
|
|
|
|
|
|
|
is=>'ro', |
464
|
|
|
|
|
|
|
lazy => 1, |
465
|
|
|
|
|
|
|
builder => '_build_non_payload_files', |
466
|
|
|
|
|
|
|
); |
467
|
|
|
|
|
|
|
|
468
|
|
|
|
|
|
|
############################################### |
469
|
|
|
|
|
|
|
|
470
|
|
|
|
|
|
|
|
471
|
|
|
|
|
|
|
has 'plugins' => ( |
472
|
|
|
|
|
|
|
is=>'rw', |
473
|
|
|
|
|
|
|
#isa=>'HashRef', |
474
|
|
|
|
|
|
|
); |
475
|
|
|
|
|
|
|
|
476
|
|
|
|
|
|
|
############################################### |
477
|
|
|
|
|
|
|
|
478
|
|
|
|
|
|
|
|
479
|
|
|
|
|
|
|
|
480
|
|
|
|
|
|
|
has 'manifests' => ( |
481
|
|
|
|
|
|
|
is => 'rw', |
482
|
|
|
|
|
|
|
lazy => 1, |
483
|
|
|
|
|
|
|
builder => '_build_manifests' |
484
|
|
|
|
|
|
|
#isa=>'HashRef', |
485
|
|
|
|
|
|
|
); |
486
|
|
|
|
|
|
|
|
487
|
|
|
|
|
|
|
############################################### |
488
|
|
|
|
|
|
|
|
489
|
|
|
|
|
|
|
|
490
|
|
|
|
|
|
|
|
491
|
|
|
|
|
|
|
has 'algos' => ( |
492
|
|
|
|
|
|
|
is=>'rw', |
493
|
|
|
|
|
|
|
#isa=>'HashRef', |
494
|
|
|
|
|
|
|
); |
495
|
|
|
|
|
|
|
|
496
|
|
|
|
|
|
|
############################################### |
497
|
|
|
|
|
|
|
|
498
|
|
|
|
|
|
|
sub _build_bag_path_arr { |
499
|
0
|
|
|
0
|
|
0
|
my ($self) = @_; |
500
|
0
|
|
|
|
|
0
|
my @split_path = File::Spec->splitdir($self->bag_path); |
501
|
0
|
|
|
|
|
0
|
return @split_path; |
502
|
|
|
|
|
|
|
} |
503
|
|
|
|
|
|
|
|
504
|
|
|
|
|
|
|
sub _build_payload_path_arr { |
505
|
0
|
|
|
0
|
|
0
|
my ($self) = @_; |
506
|
0
|
|
|
|
|
0
|
my @split_path = File::Spec->splitdir($self->payload_path); |
507
|
0
|
|
|
|
|
0
|
return @split_path; |
508
|
|
|
|
|
|
|
} |
509
|
|
|
|
|
|
|
|
510
|
|
|
|
|
|
|
sub _build_rel_payload_path { |
511
|
0
|
|
|
0
|
|
0
|
my ($self) = @_; |
512
|
0
|
|
|
|
|
0
|
my $rel_path = File::Spec->abs2rel( $self->payload_path, $self->bag_path ) ; |
513
|
0
|
|
|
|
|
0
|
return $rel_path; |
514
|
|
|
|
|
|
|
} |
515
|
|
|
|
|
|
|
|
516
|
|
|
|
|
|
|
sub _build_metadata_path_arr { |
517
|
0
|
|
|
0
|
|
0
|
my ($self) = @_; |
518
|
0
|
|
|
|
|
0
|
my @split_path = File::Spec->splitdir($self->metadata_path); |
519
|
0
|
|
|
|
|
0
|
return @split_path; |
520
|
|
|
|
|
|
|
} |
521
|
|
|
|
|
|
|
|
522
|
|
|
|
|
|
|
sub _build_rel_metadata_path { |
523
|
0
|
|
|
0
|
|
0
|
my ($self) = @_; |
524
|
0
|
|
|
|
|
0
|
my $rel_path = File::Spec->abs2rel( $self->metadata_path, $self->bag_path ) ; |
525
|
0
|
|
|
|
|
0
|
return $rel_path; |
526
|
|
|
|
|
|
|
} |
527
|
|
|
|
|
|
|
|
528
|
|
|
|
|
|
|
sub _build_checksum_algos { |
529
|
19
|
|
|
19
|
|
1026
|
my($self) = @_; |
530
|
19
|
|
|
|
|
28
|
my @checksums = keys %{ $self->manifests() }; |
|
19
|
|
|
|
|
442
|
|
531
|
19
|
|
|
|
|
238
|
return \@checksums; |
532
|
|
|
|
|
|
|
} |
533
|
|
|
|
|
|
|
|
534
|
|
|
|
|
|
|
sub _build_manifest_files { |
535
|
19
|
|
|
19
|
|
8474
|
my($self) = @_; |
536
|
19
|
|
|
|
|
23
|
my @manifest_files; |
537
|
19
|
|
|
|
|
22
|
foreach my $algo (@{$self->checksum_algos}) { |
|
19
|
|
|
|
|
365
|
|
538
|
38
|
|
|
|
|
843
|
my $manifest_file = File::Spec->catfile($self->metadata_path, "manifest-$algo.txt"); |
539
|
38
|
100
|
|
|
|
946
|
if (-f $manifest_file) { |
540
|
35
|
|
|
|
|
559
|
push @manifest_files, $manifest_file; |
541
|
|
|
|
|
|
|
} |
542
|
|
|
|
|
|
|
} |
543
|
19
|
|
|
|
|
100
|
return \@manifest_files; |
544
|
|
|
|
|
|
|
} |
545
|
|
|
|
|
|
|
|
546
|
|
|
|
|
|
|
sub _build_tagmanifest_files { |
547
|
19
|
|
|
19
|
|
2466
|
my ($self) = @_; |
548
|
19
|
|
|
|
|
42
|
my @tagmanifest_files; |
549
|
19
|
|
|
|
|
24
|
foreach my $algo (@{$self->checksum_algos}) { |
|
19
|
|
|
|
|
327
|
|
550
|
38
|
|
|
|
|
895
|
my $tagmanifest_file = File::Spec->catfile($self->metadata_path,"tagmanifest-$algo.txt"); |
551
|
38
|
100
|
|
|
|
1102
|
if (-f $tagmanifest_file) { |
552
|
35
|
|
|
|
|
147
|
push @tagmanifest_files, $tagmanifest_file; |
553
|
|
|
|
|
|
|
} |
554
|
|
|
|
|
|
|
} |
555
|
19
|
|
|
|
|
88
|
return \@tagmanifest_files; |
556
|
|
|
|
|
|
|
} |
557
|
|
|
|
|
|
|
|
558
|
|
|
|
|
|
|
sub __handle_nonportable_local_entry { |
559
|
382
|
|
|
382
|
|
500
|
my $self = shift; |
560
|
382
|
|
|
|
|
436
|
my $local_entry = shift; |
561
|
382
|
|
|
|
|
429
|
my $dir = shift; |
562
|
382
|
100
|
|
|
|
1428
|
if ($local_entry !~ m/^[a-zA-Z0-9._-]+$/) { |
563
|
4
|
|
|
|
|
15
|
my $local_entry_utf8 = decode("UTF-8", $local_entry); |
564
|
4
|
100
|
|
|
|
234
|
if ((!$self->has_force_utf8)) { |
565
|
2
|
|
|
|
|
9
|
my $hexdump = "0x" . unpack('H*', $local_entry); |
566
|
2
|
|
|
|
|
9
|
$local_entry =~m/[^a-zA-Z0-9._-]/; # to find PREMATCH, needed nextline |
567
|
2
|
|
|
|
|
5
|
my $prematch_position = $`; |
568
|
2
|
|
|
|
|
309
|
carp "possible non portable pathname detected in $dir,\n", |
569
|
|
|
|
|
|
|
"got path (hexdump)='$hexdump'(hex),\n", |
570
|
|
|
|
|
|
|
"decoded path='$local_entry_utf8'\n", |
571
|
|
|
|
|
|
|
" "." "x length($prematch_position)."^"."------- first non portable char\n"; |
572
|
|
|
|
|
|
|
} |
573
|
4
|
|
|
|
|
86
|
$local_entry = $local_entry_utf8; |
574
|
|
|
|
|
|
|
} |
575
|
382
|
|
|
|
|
2504
|
return $local_entry; |
576
|
|
|
|
|
|
|
} |
577
|
|
|
|
|
|
|
|
578
|
|
|
|
|
|
|
|
579
|
|
|
|
|
|
|
|
580
|
|
|
|
|
|
|
sub __file_find { # own implementation, because File::Find has problems with UTF8 encoded Paths under MSWin32 |
581
|
|
|
|
|
|
|
# finds recursively all files in given directory. |
582
|
|
|
|
|
|
|
# if $excludedir is defined, the content will be excluded |
583
|
95
|
|
|
95
|
|
2532
|
my ($self,$dir, $excludedir) = @_; |
584
|
95
|
100
|
|
|
|
211
|
if (defined $excludedir) { |
585
|
93
|
|
|
|
|
568
|
$excludedir = File::Spec->rel2abs( $excludedir); |
586
|
|
|
|
|
|
|
} |
587
|
95
|
|
|
|
|
152
|
my @file_paths; |
588
|
|
|
|
|
|
|
|
589
|
|
|
|
|
|
|
my $finder; |
590
|
|
|
|
|
|
|
$finder = sub { |
591
|
113
|
|
|
113
|
|
190
|
my ($current_dir) = @_; #absolute path |
592
|
113
|
|
|
|
|
176
|
my @todo; |
593
|
|
|
|
|
|
|
my @tmp_file_paths; |
594
|
113
|
|
|
|
|
4431
|
opendir( my $dh, $current_dir); |
595
|
113
|
|
|
|
|
4221
|
my @paths = File::Spec->no_upwards ( readdir $dh ); |
596
|
113
|
|
|
|
|
1431
|
closedir $dh; |
597
|
113
|
|
|
|
|
325
|
foreach my $local_entry (@paths) { |
598
|
382
|
|
|
|
|
924
|
my $path_entry = File::Spec->catdir($current_dir, $self->__handle_nonportable_local_entry($local_entry, $dir)); |
599
|
382
|
100
|
|
|
|
5886
|
if (-f $path_entry) { |
|
|
50
|
|
|
|
|
|
600
|
328
|
|
|
|
|
1114
|
push @tmp_file_paths, $path_entry; |
601
|
|
|
|
|
|
|
} elsif (-d $path_entry) { |
602
|
54
|
100
|
100
|
|
|
305
|
next if ((defined $excludedir) && ($path_entry eq $excludedir)); |
603
|
18
|
|
|
|
|
59
|
push @todo, $path_entry; |
604
|
|
|
|
|
|
|
} else { |
605
|
0
|
|
|
|
|
0
|
croak "not a file nor a dir found '$path_entry'"; |
606
|
|
|
|
|
|
|
} |
607
|
|
|
|
|
|
|
} |
608
|
113
|
|
|
|
|
423
|
push @file_paths, sort @tmp_file_paths; |
609
|
113
|
|
|
|
|
557
|
foreach my $subdir (sort @todo) { |
610
|
18
|
|
|
|
|
101
|
&$finder($subdir); |
611
|
|
|
|
|
|
|
} |
612
|
95
|
|
|
|
|
566
|
}; |
613
|
95
|
|
|
|
|
1119
|
my $absolute = File::Spec->rel2abs( $dir ); |
614
|
95
|
|
|
|
|
241
|
&$finder($absolute); |
615
|
95
|
|
|
|
|
174
|
@file_paths = map { File::Spec->abs2rel( $_, $dir)} @file_paths; |
|
328
|
|
|
|
|
15810
|
|
616
|
95
|
|
|
|
|
348
|
return @file_paths; |
617
|
|
|
|
|
|
|
} |
618
|
|
|
|
|
|
|
|
619
|
|
|
|
|
|
|
sub _build_payload_files{ |
620
|
57
|
|
|
57
|
|
614
|
my ($self) = @_; |
621
|
57
|
|
|
|
|
874
|
my $payload_dir = $self->payload_path; |
622
|
57
|
|
|
|
|
3756
|
my $reldir = File::Spec->abs2rel($payload_dir, $self->bag_path()); |
623
|
57
|
|
|
|
|
170
|
$reldir =~ s/^\.$//; |
624
|
|
|
|
|
|
|
my @payload = map { |
625
|
57
|
50
|
|
|
|
1281
|
$reldir eq "" ? $_ : File::Spec->catfile($reldir, $_) |
|
128
|
|
|
|
|
846
|
|
626
|
|
|
|
|
|
|
} $self->__file_find($payload_dir, File::Spec->rel2abs($self->metadata_path)); |
627
|
57
|
50
|
|
|
|
346
|
return wantarray ? @payload : \@payload; |
628
|
|
|
|
|
|
|
} |
629
|
|
|
|
|
|
|
|
630
|
|
|
|
|
|
|
|
631
|
|
|
|
|
|
|
sub __build_read_bagit_txt { |
632
|
117
|
|
|
117
|
|
154
|
my($self) = @_; |
633
|
117
|
|
|
|
|
1912
|
my $bagit = $self->metadata_path; |
634
|
117
|
|
|
|
|
1639
|
my $file = File::Spec->catfile($bagit, "bagit.txt"); |
635
|
117
|
100
|
|
|
|
4905
|
open(my $BAGIT, "<:encoding(UTF-8)", $file) or croak("Cannot read '$file': $!"); |
636
|
116
|
|
|
|
|
10736
|
my $version_string = <$BAGIT>; |
637
|
116
|
|
|
|
|
1534
|
my $encoding_string = <$BAGIT>; |
638
|
116
|
|
|
|
|
1490
|
close($BAGIT); |
639
|
116
|
50
|
|
|
|
376
|
if (defined $version_string) { |
640
|
116
|
|
|
|
|
772
|
$version_string =~ s/[\r\n]//; |
641
|
|
|
|
|
|
|
} |
642
|
116
|
100
|
|
|
|
292
|
if (defined $encoding_string) { |
643
|
114
|
|
|
|
|
321
|
$encoding_string =~s/[\r\n]//; |
644
|
|
|
|
|
|
|
} |
645
|
116
|
|
|
|
|
661
|
return ($version_string, $encoding_string, $file); |
646
|
|
|
|
|
|
|
} |
647
|
|
|
|
|
|
|
|
648
|
|
|
|
|
|
|
sub _build_bag_version { |
649
|
61
|
|
|
61
|
|
2350
|
my($self) = @_; |
650
|
61
|
|
|
|
|
139
|
my ($version_string, $encoding_string, $file) = $self->__build_read_bagit_txt(); |
651
|
60
|
50
|
|
|
|
151
|
croak "Version line missed in '$file" unless defined $version_string; |
652
|
60
|
100
|
|
|
|
368
|
if ($version_string =~ /^BagIt-Version: ([01]\.[0-9]+)$/) { |
653
|
57
|
|
|
|
|
326
|
return $1; |
654
|
|
|
|
|
|
|
} else { |
655
|
3
|
|
|
|
|
30
|
$version_string =~ s/\r//; |
656
|
3
|
|
|
|
|
10
|
$version_string =~ s/^\N{U+FEFF}//; |
657
|
3
|
|
|
|
|
58
|
croak "Version string '$version_string' of '$file' is incorrect"; |
658
|
|
|
|
|
|
|
}; |
659
|
|
|
|
|
|
|
} |
660
|
|
|
|
|
|
|
|
661
|
|
|
|
|
|
|
sub _build_bag_encoding { |
662
|
56
|
|
|
56
|
|
493
|
my($self) = @_; |
663
|
56
|
|
|
|
|
111
|
my ($version_string, $encoding_string, $file) = $self->__build_read_bagit_txt(); |
664
|
56
|
100
|
|
|
|
173
|
croak "Encoding line missed in '$file" unless defined $encoding_string; |
665
|
55
|
50
|
|
|
|
115
|
croak "Encoding '$encoding_string' of '$file' not supported by current Archive::BagIt module!" unless ($encoding_string ne "UTF-8"); |
666
|
55
|
|
|
|
|
200
|
return $encoding_string; |
667
|
|
|
|
|
|
|
} |
668
|
|
|
|
|
|
|
|
669
|
|
|
|
|
|
|
sub __sort_bag_info { |
670
|
|
|
|
|
|
|
my @sorted = sort { |
671
|
1
|
|
|
1
|
|
19
|
my %tmpa = %{$a}; |
|
11
|
|
|
|
|
12
|
|
|
11
|
|
|
|
|
18
|
|
672
|
11
|
|
|
|
|
12
|
my %tmpb = %{$b}; |
|
11
|
|
|
|
|
21
|
|
673
|
11
|
|
|
|
|
16
|
my ($ka, $va) = each %tmpa; |
674
|
11
|
|
|
|
|
16
|
my ($kb, $vb) = each %tmpb; |
675
|
11
|
|
|
|
|
13
|
my $kres = $ka cmp $kb; |
676
|
11
|
100
|
|
|
|
17
|
if ($kres != 0) { |
677
|
10
|
|
|
|
|
29
|
return $kres; |
678
|
|
|
|
|
|
|
} else { |
679
|
1
|
|
|
|
|
3
|
return $va cmp $vb; |
680
|
|
|
|
|
|
|
} |
681
|
|
|
|
|
|
|
} @_; |
682
|
1
|
|
|
|
|
4
|
return @sorted; |
683
|
|
|
|
|
|
|
} |
684
|
|
|
|
|
|
|
|
685
|
|
|
|
|
|
|
sub _parse_bag_info { # parses a bag-info textblob |
686
|
757
|
|
|
757
|
|
584719
|
my ($self, $textblob) = @_; |
687
|
|
|
|
|
|
|
# metadata elements are OPTIONAL and MAY be repeated. Because "bag- |
688
|
|
|
|
|
|
|
# info.txt" is intended for human reading and editing, ordering MAY be |
689
|
|
|
|
|
|
|
# significant and the ordering of metadata elements MUST be preserved. |
690
|
|
|
|
|
|
|
# |
691
|
|
|
|
|
|
|
# A metadata element MUST consist of a label, a colon ":", a single |
692
|
|
|
|
|
|
|
# linear whitespace character (space or tab), and a value that is |
693
|
|
|
|
|
|
|
# terminated with an LF, a CR, or a CRLF. |
694
|
|
|
|
|
|
|
# |
695
|
|
|
|
|
|
|
# The label MUST NOT contain a colon (:), LF, or CR. The label MAY |
696
|
|
|
|
|
|
|
# contain linear whitespace characters but MUST NOT start or end with |
697
|
|
|
|
|
|
|
# whitespace. |
698
|
|
|
|
|
|
|
# |
699
|
|
|
|
|
|
|
# It is RECOMMENDED that lines not exceed 79 characters in length. |
700
|
|
|
|
|
|
|
# Long values MAY be continued onto the next line by inserting a LF, |
701
|
|
|
|
|
|
|
# CR, or CRLF, and then indenting the next line with one or more linear |
702
|
|
|
|
|
|
|
# white space characters (spaces or tabs). Except for linebreaks, such |
703
|
|
|
|
|
|
|
# padding does not form part of the value. |
704
|
|
|
|
|
|
|
# |
705
|
|
|
|
|
|
|
# Implementations wishing to support previous BagIt versions MUST |
706
|
|
|
|
|
|
|
# accept multiple linear whitespace characters before and after the |
707
|
|
|
|
|
|
|
# colon when the bag version is earlier than 1.0; such whitespace does |
708
|
|
|
|
|
|
|
# not form part of the label or value. |
709
|
|
|
|
|
|
|
# find all labels |
710
|
757
|
|
|
|
|
1019
|
my @labels; |
711
|
757
|
|
|
|
|
5747
|
while ($textblob =~ s/^([^:\s]+)\s*:\s*//m) { # label if starts with chars not colon or whitespace followed by zero or more spaces, a colon, zero or more spaces |
712
|
|
|
|
|
|
|
# label found |
713
|
924
|
|
|
|
|
2275
|
my $label = $1; |
714
|
924
|
|
|
|
|
1176
|
my $value=''; |
715
|
924
|
100
|
|
|
|
43402
|
if ($textblob =~ s/(.+?)(?=^\S)//ms) { |
|
|
50
|
|
|
|
|
|
716
|
|
|
|
|
|
|
# value if rest string starts with chars not \r and/or \n until a non-whitespace after \r\n |
717
|
167
|
|
|
|
|
348
|
$value = chomp_portable($1); |
718
|
|
|
|
|
|
|
} elsif ($textblob =~ s/(.*)//s) { |
719
|
757
|
|
|
|
|
1863
|
$value = chomp_portable($1); |
720
|
|
|
|
|
|
|
} |
721
|
924
|
50
|
|
|
|
1824
|
if (defined $label) { |
722
|
924
|
|
|
|
|
4255
|
push @labels, { $label => $value }; |
723
|
|
|
|
|
|
|
} |
724
|
|
|
|
|
|
|
} |
725
|
|
|
|
|
|
|
# The RFC does not allow reordering: |
726
|
|
|
|
|
|
|
#my @sorted = __sort_bag_info(@labels); |
727
|
|
|
|
|
|
|
#return \@sorted; |
728
|
757
|
|
|
|
|
1934
|
return \@labels; |
729
|
|
|
|
|
|
|
} |
730
|
|
|
|
|
|
|
|
731
|
|
|
|
|
|
|
sub _build_bag_info { |
732
|
60
|
|
|
60
|
|
2792
|
my ($self) = @_; |
733
|
60
|
|
|
|
|
996
|
my $bagit = $self->metadata_path; |
734
|
60
|
|
|
|
|
1038
|
my $file = File::Spec->catfile($bagit, "bag-info.txt"); |
735
|
60
|
100
|
|
|
|
1293
|
if (-e $file) { |
736
|
42
|
50
|
|
|
|
1470
|
open(my $BAGINFO, "<:encoding(UTF-8)", $file) or croak("Cannot read $file: $!"); |
737
|
42
|
|
|
|
|
2747
|
my @lines; |
738
|
42
|
|
|
|
|
998
|
while ( my $line = <$BAGINFO>) { |
739
|
197
|
|
|
|
|
1234
|
push @lines, $line; |
740
|
|
|
|
|
|
|
} |
741
|
42
|
|
|
|
|
506
|
close($BAGINFO); |
742
|
42
|
|
|
|
|
175
|
my $lines = join("", @lines); |
743
|
42
|
|
|
|
|
137
|
return $self->_parse_bag_info($lines); |
744
|
|
|
|
|
|
|
} |
745
|
|
|
|
|
|
|
# bag-info.txt is optional |
746
|
18
|
|
|
|
|
91
|
return; |
747
|
|
|
|
|
|
|
} |
748
|
|
|
|
|
|
|
|
749
|
|
|
|
|
|
|
sub _build_non_payload_files { |
750
|
35
|
|
|
35
|
|
623
|
my ($self) = @_; |
751
|
35
|
|
|
|
|
547
|
my $non_payload_dir = $self->metadata_path(); |
752
|
35
|
|
|
|
|
1918
|
my $reldir = File::Spec->abs2rel($non_payload_dir, $self->bag_path()); |
753
|
35
|
|
|
|
|
166
|
$reldir =~ s/^\.$//; |
754
|
|
|
|
|
|
|
my @non_payload = map { |
755
|
35
|
50
|
|
|
|
741
|
$reldir eq "" ? $_ : File::Spec->catfile($reldir, $_) |
|
174
|
|
|
|
|
321
|
|
756
|
|
|
|
|
|
|
} $self->__file_find($non_payload_dir, File::Spec->rel2abs($self->payload_path)); |
757
|
35
|
50
|
|
|
|
276
|
return wantarray ? @non_payload : \@non_payload; |
758
|
|
|
|
|
|
|
} |
759
|
|
|
|
|
|
|
|
760
|
|
|
|
|
|
|
sub _build_forced_fixity_algorithm { |
761
|
48
|
|
|
48
|
|
417
|
my ($self) = @_; |
762
|
48
|
50
|
|
|
|
148
|
if ($self->use_plugins()) { |
763
|
0
|
|
|
|
|
0
|
return; |
764
|
|
|
|
|
|
|
} else { |
765
|
48
|
100
|
|
|
|
734
|
if ($self->bag_version() >= 1.0) { |
766
|
32
|
|
|
|
|
923
|
return Archive::BagIt::Plugin::Algorithm::SHA512->new(bagit => $self); |
767
|
|
|
|
|
|
|
} |
768
|
|
|
|
|
|
|
else { |
769
|
16
|
|
|
|
|
479
|
return Archive::BagIt::Plugin::Algorithm::MD5->new(bagit => $self); |
770
|
|
|
|
|
|
|
} |
771
|
|
|
|
|
|
|
} |
772
|
|
|
|
|
|
|
} |
773
|
|
|
|
|
|
|
|
774
|
|
|
|
|
|
|
############################################### |
775
|
|
|
|
|
|
|
|
776
|
|
|
|
|
|
|
|
777
|
|
|
|
|
|
|
sub load_plugins { |
778
|
251
|
|
|
251
|
1
|
523
|
my ($self, @plugins) = @_; |
779
|
|
|
|
|
|
|
|
780
|
|
|
|
|
|
|
#p(@plugins); |
781
|
251
|
|
|
|
|
501
|
my $loaded_plugins = $self->plugins; |
782
|
251
|
|
|
|
|
395
|
@plugins = grep { not exists $loaded_plugins->{$_} } @plugins; |
|
334
|
|
|
|
|
959
|
|
783
|
|
|
|
|
|
|
|
784
|
251
|
50
|
|
|
|
572
|
return if @plugins == 0; |
785
|
251
|
|
|
|
|
446
|
foreach my $plugin (@plugins) { |
786
|
334
|
50
|
|
|
|
1208
|
load_class ($plugin) or croak ("Can't load $plugin"); |
787
|
334
|
|
|
|
|
26849
|
$plugin->new({bagit => $self}); |
788
|
|
|
|
|
|
|
} |
789
|
|
|
|
|
|
|
|
790
|
251
|
|
|
|
|
1243
|
return 1; |
791
|
|
|
|
|
|
|
} |
792
|
|
|
|
|
|
|
|
793
|
|
|
|
|
|
|
############################################### |
794
|
|
|
|
|
|
|
|
795
|
|
|
|
|
|
|
|
796
|
|
|
|
|
|
|
sub load { |
797
|
1
|
|
|
1
|
1
|
1418
|
my ($self) = @_; |
798
|
|
|
|
|
|
|
# call trigger |
799
|
1
|
|
|
|
|
4
|
$self->bag_path; |
800
|
1
|
|
|
|
|
27
|
$self->bag_version; |
801
|
1
|
|
|
|
|
25
|
$self->bag_encoding; |
802
|
1
|
|
|
|
|
25
|
$self->bag_info; |
803
|
1
|
|
|
|
|
21
|
$self->payload_path; |
804
|
1
|
|
|
|
|
23
|
$self->manifest_files; |
805
|
1
|
|
|
|
|
23
|
$self->checksum_algos; |
806
|
1
|
|
|
|
|
23
|
$self->tagmanifest_files; |
807
|
1
|
|
|
|
|
13
|
return 1; |
808
|
|
|
|
|
|
|
} |
809
|
|
|
|
|
|
|
|
810
|
|
|
|
|
|
|
############################################### |
811
|
|
|
|
|
|
|
|
812
|
|
|
|
|
|
|
|
813
|
|
|
|
|
|
|
sub verify_bag { |
814
|
61
|
|
|
61
|
1
|
32222
|
my ($self,$opts) = @_; |
815
|
|
|
|
|
|
|
#removed the ability to pass in a bag in the parameters, but might want options |
816
|
|
|
|
|
|
|
#like $return all errors rather than dying on first one |
817
|
61
|
|
|
|
|
159
|
my $bagit = $self->bag_path; |
818
|
61
|
|
|
|
|
1380
|
my $version = $self->bag_version(); # to call trigger |
819
|
57
|
|
|
|
|
1286
|
my $encoding = $self->bag_encoding(); # to call trigger |
820
|
56
|
|
|
|
|
178
|
my $baginfo = $self->verify_baginfo(); #to call trigger |
821
|
|
|
|
|
|
|
|
822
|
56
|
|
|
|
|
1301
|
my $fetch_file = File::Spec->catfile($self->metadata_path, "fetch.txt"); |
823
|
56
|
|
|
|
|
1624
|
my $payload_dir = $self->payload_path; |
824
|
56
|
|
|
|
|
364
|
my $return_all_errors = $opts->{return_all_errors}; |
825
|
|
|
|
|
|
|
|
826
|
56
|
100
|
|
|
|
1215
|
if (-f $fetch_file) { |
827
|
7
|
|
|
|
|
104
|
croak("Fetching via file '$fetch_file' is not supported by current Archive::BagIt implementation") |
828
|
|
|
|
|
|
|
} |
829
|
|
|
|
|
|
|
# check forced fixity |
830
|
49
|
50
|
|
|
|
177
|
if ($self->has_forced_fixity_algorithm()) { |
831
|
49
|
|
|
|
|
1001
|
my $forced_fixity_alg = $self->forced_fixity_algorithm()->name(); |
832
|
49
|
|
|
|
|
1067
|
my $manifest_file = File::Spec->catfile($self->metadata_path, "manifest-$forced_fixity_alg.txt"); |
833
|
49
|
100
|
|
|
|
1555
|
croak("Manifest '$manifest_file' is not a regular file or does not exist for given bagit version '$version'") unless -f ($manifest_file); |
834
|
|
|
|
|
|
|
} |
835
|
48
|
50
|
|
|
|
560
|
croak("Payload-directory '$payload_dir' is not a directory or does not exist") unless -d ($payload_dir); |
836
|
|
|
|
|
|
|
|
837
|
48
|
50
|
|
|
|
193
|
unless ($version > .95) { |
838
|
0
|
|
|
|
|
0
|
croak ("Bag Version $version is unsupported"); |
839
|
|
|
|
|
|
|
} |
840
|
|
|
|
|
|
|
|
841
|
|
|
|
|
|
|
|
842
|
48
|
|
|
|
|
74
|
my @errors; |
843
|
|
|
|
|
|
|
|
844
|
|
|
|
|
|
|
|
845
|
|
|
|
|
|
|
# check for manifests |
846
|
48
|
|
|
|
|
57
|
foreach my $algorithm ( keys %{ $self->manifests }) { |
|
48
|
|
|
|
|
1090
|
|
847
|
85
|
|
|
|
|
1864
|
my $res = $self->manifests->{$algorithm}->verify_manifest($self->payload_files, $return_all_errors); |
848
|
67
|
50
|
66
|
|
|
298
|
if ((defined $res) && ($res ne "1")) { push @errors, $res; } |
|
0
|
|
|
|
|
0
|
|
849
|
|
|
|
|
|
|
} |
850
|
|
|
|
|
|
|
#check for tagmanifests |
851
|
30
|
|
|
|
|
58
|
foreach my $algorithm ( keys %{ $self->manifests }) { |
|
30
|
|
|
|
|
649
|
|
852
|
57
|
|
|
|
|
1232
|
my $res = $self->manifests->{$algorithm}->verify_tagmanifest($self->non_payload_files, $return_all_errors); |
853
|
53
|
50
|
66
|
|
|
241
|
if ((defined $res) && ($res ne "1")) { push @errors, $res; } |
|
0
|
|
|
|
|
0
|
|
854
|
|
|
|
|
|
|
} |
855
|
26
|
|
|
|
|
52
|
push @{$self->{errors}}, @errors; |
|
26
|
|
|
|
|
72
|
|
856
|
26
|
|
|
|
|
578
|
my $err = $self->errors(); |
857
|
26
|
|
|
|
|
224
|
my @err = @{ $err }; |
|
26
|
|
|
|
|
60
|
|
858
|
26
|
100
|
|
|
|
65
|
if (scalar( @err ) > 0) { |
859
|
7
|
|
|
|
|
173
|
croak join("\n","bag verify for bagit version '$version' failed with invalid files.", @err); |
860
|
|
|
|
|
|
|
} |
861
|
19
|
|
|
|
|
95
|
return 1; |
862
|
|
|
|
|
|
|
} |
863
|
|
|
|
|
|
|
|
864
|
|
|
|
|
|
|
|
865
|
|
|
|
|
|
|
sub calc_payload_oxum { |
866
|
79
|
|
|
79
|
1
|
123
|
my($self) = @_; |
867
|
79
|
|
|
|
|
81
|
my @payload = @{$self->payload_files}; |
|
79
|
|
|
|
|
1477
|
|
868
|
79
|
|
|
|
|
320
|
my $octets=0; |
869
|
79
|
|
|
|
|
98
|
my $streamcount = scalar @payload; |
870
|
79
|
|
|
|
|
138
|
foreach my $local_name (@payload) {# local_name is relative to bagit base |
871
|
190
|
|
|
|
|
1497
|
my $file = File::Spec->catfile($self->bag_path(), $local_name); |
872
|
190
|
50
|
|
|
|
2345
|
if (-e $file) { |
873
|
190
|
|
|
|
|
397
|
my $filesize = 0; |
874
|
190
|
100
|
|
|
|
2138
|
$filesize = -s $file or carp "empty file $file detected"; |
875
|
190
|
|
|
|
|
491
|
$octets += $filesize; |
876
|
0
|
|
|
|
|
0
|
} else { croak "file $file does not exist, $!"; } |
877
|
|
|
|
|
|
|
} |
878
|
79
|
|
|
|
|
303
|
return ($octets, $streamcount); |
879
|
|
|
|
|
|
|
} |
880
|
|
|
|
|
|
|
|
881
|
|
|
|
|
|
|
|
882
|
|
|
|
|
|
|
sub calc_bagsize { |
883
|
16
|
|
|
16
|
1
|
42
|
my($self) = @_; |
884
|
16
|
|
|
|
|
52
|
my ($octets,$streamcount) = $self->calc_payload_oxum(); |
885
|
16
|
50
|
|
|
|
54
|
if ($octets < 1024) { return "$octets B"; } |
|
16
|
0
|
|
|
|
88
|
|
|
|
0
|
|
|
|
|
|
|
|
0
|
|
|
|
|
|
886
|
0
|
|
|
|
|
0
|
elsif ($octets < 1024*1024) {return sprintf("%0.1f kB", $octets/1024); } |
887
|
0
|
|
|
|
|
0
|
elsif ($octets < 1024*1024*1024) {return sprintf "%0.1f MB", $octets/(1024*1024); } |
888
|
0
|
|
|
|
|
0
|
elsif ($octets < 1024*1024*1024*1024) {return sprintf "%0.1f GB", $octets/(1024*1024*1024); } |
889
|
0
|
|
|
|
|
0
|
else { return sprintf "%0.2f TB", $octets/(1024*1024*1024*1024); } |
890
|
|
|
|
|
|
|
} |
891
|
|
|
|
|
|
|
|
892
|
|
|
|
|
|
|
|
893
|
|
|
|
|
|
|
sub create_bagit { |
894
|
16
|
|
|
16
|
1
|
27
|
my($self) = @_; |
895
|
16
|
|
|
|
|
322
|
my $metadata_path = $self->metadata_path(); |
896
|
16
|
|
|
|
|
270
|
my $bagit_path = File::Spec->catfile( $metadata_path, "bagit.txt"); |
897
|
16
|
50
|
|
|
|
1263
|
open(my $BAGIT, ">:encoding(UTF-8)", $bagit_path) or croak("Can't open $bagit_path for writing: $!"); |
898
|
16
|
|
|
|
|
1318
|
print($BAGIT "BagIt-Version: 1.0\nTag-File-Character-Encoding: UTF-8"); |
899
|
16
|
|
|
|
|
1003
|
close($BAGIT); |
900
|
16
|
|
|
|
|
103
|
return 1; |
901
|
|
|
|
|
|
|
} |
902
|
|
|
|
|
|
|
|
903
|
|
|
|
|
|
|
|
904
|
|
|
|
|
|
|
sub create_baginfo { |
905
|
16
|
|
|
16
|
1
|
50
|
my($self) = @_; # because bag-info.txt allows multiple key-value-entries, hash is replaced |
906
|
16
|
|
|
|
|
931
|
$self->add_or_replace_baginfo_by_key('Bagging-Date', POSIX::strftime("%Y-%m-%d", gmtime(time))); |
907
|
16
|
|
|
|
|
50
|
$self->add_or_replace_baginfo_by_key('Bag-Software-Agent', 'Archive::BagIt '); |
908
|
16
|
|
|
|
|
67
|
my ($octets, $streams) = $self->calc_payload_oxum(); |
909
|
16
|
|
|
|
|
89
|
$self->add_or_replace_baginfo_by_key('Payload-Oxum', "$octets.$streams"); |
910
|
16
|
|
|
|
|
55
|
$self->add_or_replace_baginfo_by_key('Bag-Size', $self->calc_bagsize()); |
911
|
|
|
|
|
|
|
# The RFC does not allow reordering: |
912
|
16
|
|
|
|
|
352
|
my $metadata_path = $self->metadata_path(); |
913
|
16
|
|
|
|
|
258
|
my $bag_info_path = File::Spec->catfile( $metadata_path, "bag-info.txt"); |
914
|
16
|
50
|
|
|
|
1109
|
open(my $BAGINFO, ">:encoding(UTF-8)", $bag_info_path) or croak("Can't open $bag_info_path for writing: $!"); |
915
|
16
|
|
|
|
|
1110
|
foreach my $entry (@{ $self->bag_info() }) { |
|
16
|
|
|
|
|
395
|
|
916
|
64
|
|
|
|
|
196
|
my %tmp = %{ $entry }; |
|
64
|
|
|
|
|
176
|
|
917
|
64
|
|
|
|
|
128
|
my ($key, $value) = %tmp; |
918
|
64
|
50
|
|
|
|
146
|
if (-1 < index($key,":")) { carp "key should not contain a colon! (searchkey='$key')"; } |
|
0
|
|
|
|
|
0
|
|
919
|
64
|
|
|
|
|
262
|
print($BAGINFO "$key: $value\n"); |
920
|
|
|
|
|
|
|
} |
921
|
16
|
|
|
|
|
1030
|
close($BAGINFO); |
922
|
16
|
|
|
|
|
104
|
return 1; |
923
|
|
|
|
|
|
|
} |
924
|
|
|
|
|
|
|
|
925
|
|
|
|
|
|
|
|
926
|
|
|
|
|
|
|
sub store { |
927
|
16
|
|
|
16
|
1
|
33
|
my($self) = @_; |
928
|
16
|
|
|
|
|
47
|
$self->create_bagit(); |
929
|
16
|
|
|
|
|
76
|
$self->create_baginfo(); |
930
|
|
|
|
|
|
|
# it is important to create all manifest files first, because tagmanifest should include all manifest-xxx.txt |
931
|
16
|
|
|
|
|
21
|
foreach my $algorithm ( keys %{ $self->manifests }) { |
|
16
|
|
|
|
|
418
|
|
932
|
32
|
|
|
|
|
802
|
$self->manifests->{$algorithm}->create_manifest(); |
933
|
|
|
|
|
|
|
} |
934
|
16
|
|
|
|
|
44
|
foreach my $algorithm ( keys %{ $self->manifests }) { |
|
16
|
|
|
|
|
423
|
|
935
|
32
|
|
|
|
|
847
|
$self->manifests->{$algorithm}->create_tagmanifest(); |
936
|
|
|
|
|
|
|
} |
937
|
|
|
|
|
|
|
# retrigger builds |
938
|
16
|
|
|
|
|
137
|
$self->{checksum_algos} = $self->_build_checksum_algos(); |
939
|
16
|
|
|
|
|
55
|
$self->{tagmanifest_files} = $self->_build_tagmanifest_files(); |
940
|
16
|
|
|
|
|
83
|
$self->{manifest_files} = $self->_build_manifest_files(); |
941
|
16
|
|
|
|
|
24
|
return 1; |
942
|
|
|
|
|
|
|
} |
943
|
|
|
|
|
|
|
|
944
|
|
|
|
|
|
|
|
945
|
|
|
|
|
|
|
sub init_metadata { |
946
|
16
|
|
|
16
|
1
|
40
|
my ($class, $bag_path, $options) = @_; |
947
|
16
|
|
|
|
|
56
|
$bag_path =~ s#/$##; # replace trailing slash |
948
|
16
|
50
|
|
|
|
237
|
unless ( -d $bag_path) { croak ( "source bag directory '$bag_path' doesn't exist"); } |
|
0
|
|
|
|
|
0
|
|
949
|
16
|
|
|
|
|
490
|
my $self = $class->new(bag_path=>$bag_path, %$options); |
950
|
16
|
100
|
|
|
|
290
|
carp "no payload path" if ! -d $self->payload_path; |
951
|
16
|
100
|
|
|
|
380
|
unless ( -d $self->payload_path) { |
952
|
2
|
|
|
|
|
198
|
rename ($bag_path, $bag_path.".tmp"); |
953
|
2
|
|
|
|
|
121
|
mkdir ($bag_path); |
954
|
2
|
|
|
|
|
66
|
rename ($bag_path.".tmp", $self->payload_path); |
955
|
|
|
|
|
|
|
} |
956
|
16
|
50
|
|
|
|
698
|
unless ( -d $self->metadata_path) { |
957
|
|
|
|
|
|
|
#metadata path is not the root path for some reason |
958
|
0
|
|
|
|
|
0
|
mkdir ($self->metadata_path); |
959
|
|
|
|
|
|
|
} |
960
|
16
|
|
|
|
|
85
|
$self->store(); |
961
|
16
|
|
|
|
|
50
|
return $self; |
962
|
|
|
|
|
|
|
} |
963
|
|
|
|
|
|
|
|
964
|
|
|
|
|
|
|
|
965
|
|
|
|
|
|
|
sub make_bag { |
966
|
16
|
|
|
16
|
1
|
45731
|
my ($class, $bag_path, $options) = @_; |
967
|
16
|
|
|
|
|
34
|
my $isa = ref $class; |
968
|
16
|
50
|
|
|
|
52
|
if ($isa eq "Archive::BagIt") { # not a class, but an object! |
969
|
0
|
|
|
|
|
0
|
croak "make_bag() only a class subroutine, not useable with objects. Try store() instead!\n"; |
970
|
|
|
|
|
|
|
} |
971
|
16
|
|
|
|
|
50
|
my $self = $class->init_metadata($bag_path, $options); |
972
|
16
|
|
|
|
|
58
|
return $self; |
973
|
|
|
|
|
|
|
} |
974
|
|
|
|
|
|
|
|
975
|
|
|
|
|
|
|
|
976
|
|
|
|
|
|
|
|
977
|
|
|
|
|
|
|
|
978
|
|
|
|
|
|
|
|
979
|
|
|
|
|
|
|
__PACKAGE__->meta->make_immutable; |
980
|
|
|
|
|
|
|
|
981
|
|
|
|
|
|
|
1; |
982
|
|
|
|
|
|
|
|
983
|
|
|
|
|
|
|
__END__ |